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    mrps-35 Small ribosomal subunit protein mS35 mitochondrial conserved domain-containing protein [ Caenorhabditis elegans ]

    Gene ID: 180240, updated on 9-Dec-2024

    Summary

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    Official Symbol
    mrps-35
    Official Full Name
    Small ribosomal subunit protein mS35 mitochondrial conserved domain-containing protein
    Primary source
    WormBase:WBGene00012697
    Locus tag
    CELE_Y39B6A.39
    See related
    AllianceGenome:WB:WBGene00012697
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to be a structural constituent of ribosome. Predicted to be involved in mitochondrial translation. Predicted to be located in ribosome. Predicted to be part of mitochondrial small ribosomal subunit. Orthologous to human MRPS35 (mitochondrial ribosomal protein S35). [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See mrps-35 in Genome Data Viewer
    Location:
    chromosome: V
    Exon count:
    4
    Sequence:
    Chromosome: V; NC_003283.11 (18981306..18985865)

    Chromosome V - NC_003283.11Genomic Context describing neighboring genes Neighboring gene Uncharacterized protein Neighboring gene Major facilitator superfamily (MFS) profile domain-containing protein Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene SWIM-type domain-containing protein Neighboring gene REPS (RalBP1-associated Eps domain-containing protein) homolog Neighboring gene Structural protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003283.11

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Synthetic lethal interactions identify phenotypic "interologs" of the spindle assembly checkpoint components. Tarailo M, et al. Genetics, 2007 Dec. PMID 18073444, Free PMC Article
    2. Functional identification of microRNA-centered complexes in C. elegans. Hebbar S, et al. Sci Rep, 2022 May 3. PMID 35504914, Free PMC Article
    3. RNA targets and specificity of Staufen, a double-stranded RNA-binding protein in Caenorhabditis elegans. LeGendre JB, et al. J Biol Chem, 2013 Jan 25. PMID 23195953, Free PMC Article
    4. Large-scale RNAi screens identify novel genes that interact with the C. elegans retinoblastoma pathway as well as splicing-related components with synMuv B activity. Ceron J, et al. BMC Dev Biol, 2007 Apr 6. PMID 17417969, Free PMC Article
    5. Novel LOTUS-domain proteins are organizational hubs that recruit C. elegans Vasa to germ granules. Cipriani PG, et al. Elife, 2021 Jul 5. PMID 34223818, Free PMC Article

    See all (8) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Function Evidence Code Pubs
    enables structural constituent of ribosome IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables structural constituent of ribosome IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in mitochondrial translation IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    part_of mitochondrial small ribosomal subunit IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    located_in ribosome IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    Small ribosomal subunit protein mS35 mitochondrial conserved domain-containing protein
    NP_001256837.1
    • Confirmed by transcript evidence
    NP_001256838.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003283.11 Reference assembly

      Range
      18981306..18985865
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001269908.5 → NP_001256837.1  Small ribosomal subunit protein mS35 mitochondrial conserved domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001256837.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9NEI6
      Conserved Domains (1) summary
      cl39065
      Location:190 → 296
      MRP-S28; Mitochondrial ribosomal subunit protein

    2. NM_001269909.3 → NP_001256838.1  Small ribosomal subunit protein mS35 mitochondrial conserved domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001256838.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      D4YWC8
      Conserved Domains (1) summary
      cl39065
      Location:5 → 82
      MRP-S28; Mitochondrial ribosomal subunit protein
    Nucleotide Protein
    Heading Accession and Version

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