U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    npa-1 Polyprotein allergen nematode domain-containing protein [ Caenorhabditis elegans ]

    Gene ID: 179095, updated on 17-Oct-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    npa-1
    Official Full Name
    Polyprotein allergen nematode domain-containing protein
    Primary source
    WormBase:WBGene00003786
    Locus tag
    CELE_VC5.3
    See related
    AllianceGenome:WB:WBGene00003786
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See npa-1 in Genome Data Viewer
    Location:
    chromosome: V
    Exon count:
    10
    Sequence:
    Chromosome: V; NC_003283.11 (7075787..7081580)

    Chromosome V - NC_003283.11Genomic Context describing neighboring genes Neighboring gene tRNA-Glu Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene MHC class I antigen;Neuropeptide-Like Protein Neighboring gene Histone acetyltransferase Tip60 homolog Neighboring gene ncRNA Neighboring gene Laminin EGF-like domain-containing protein Neighboring gene ncRNA

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_003283.11

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Lifespan regulation by evolutionarily conserved genes essential for viability. Curran SP, et al. PLoS Genet, 2007 Apr 6. PMID 17411345, Free PMC Article
    2. Peroxiredoxin 2 is required for the redox mediated adaptation to exercise. Xia Q, et al. Redox Biol, 2023 Apr. PMID 36791646, Free PMC Article
    3. Trifunctional cross-linker for mapping protein-protein interaction networks and comparing protein conformational states. Tan D, et al. Elife, 2016 Mar 8. PMID 26952210, Free PMC Article
    4. Transcriptomics of ivermectin response in Caenorhabditis elegans: Integrating abamectin quantitative trait loci and comparison to the Ivermectin-exposed DA1316 strain. Dube F, et al. PLoS One, 2023. PMID 37141255, Free PMC Article
    5. Screening for cold tolerance genes in C. elegans, whose expressions are affected by anticancer drugs camptothecin and leptomycin B. Okahata M, et al. Sci Rep, 2024 Mar 5. PMID 38443452, Free PMC Article

    See all (7) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

    Go to the top of the page Help
    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Go to the top of the page Help

    Markers

    Homology

    General protein information

    Go to the top of the page Help
    Preferred Names
    Polyprotein allergen nematode domain-containing protein
    NP_001379899.1
    • Confirmed by transcript evidence
    NP_504795.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003283.11 Reference assembly

      Range
      7075787..7081580
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001392540.1 → NP_001379899.1  Polyprotein allergen nematode domain-containing protein [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q6R020, Q86S16
      Conserved Domains (1) summary
      pfam16469
      Location:260 → 378
      NPA; Nematode polyprotein allergen ABA-1

    2. NM_072394.8 → NP_504795.1  Polyprotein allergen nematode domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_504795.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      G5EF32
      Conserved Domains (1) summary
      pfam16469
      Location:271 → 388
      NPA; Nematode polyprotein allergen ABA-1
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials
    Tools