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    srsx-5 G-protein coupled receptors family 1 profile domain-containing protein [ Caenorhabditis elegans ]

    Gene ID: 190817, updated on 9-Dec-2024

    Summary

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    Official Symbol
    srsx-5
    Official Full Name
    G-protein coupled receptors family 1 profile domain-containing protein
    Primary source
    WormBase:WBGene00022404
    Locus tag
    CELE_Y97E10B.2
    See related
    AllianceGenome:WB:WBGene00022404
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to enable G protein-coupled receptor activity. Predicted to be involved in G protein-coupled receptor signaling pathway. Predicted to be located in membrane. Is expressed in ASIL; ASIR; ASKL; ASKR; and AWC-OFF. [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See srsx-5 in Genome Data Viewer
    Location:
    chromosome: V
    Exon count:
    3
    Sequence:
    Chromosome: V; NC_003283.11 (7928960..7930416)

    Chromosome V - NC_003283.11Genomic Context describing neighboring genes Neighboring gene G_PROTEIN_RECEP_F1_2 domain-containing protein Neighboring gene G-protein coupled receptors family 1 profile domain-containing protein Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene Sodium/calcium exchanger membrane region domain-containing protein Neighboring gene pseudo

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003283.11

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. C. elegans-based chemosensation strategy for the early detection of cancer metabolites in urine samples. Lanza E, et al. Sci Rep, 2021 Aug 24. PMID 34429473, Free PMC Article
    2. The putative chemoreceptor families of C. elegans. Robertson HM, et al. WormBook, 2006 Jan 6. PMID 18050473, Free PMC Article
    3. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by WormBase

    Function Evidence Code Pubs
    enables G protein-coupled receptor activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in G protein-coupled receptor signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    G-protein coupled receptors family 1 profile domain-containing protein
    NP_505038.2
    • Partially confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003283.11 Reference assembly

      Range
      7928960..7930416
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_072637.3 → NP_505038.2  G-protein coupled receptors family 1 profile domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_505038.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q965R6
      Conserved Domains (2) summary
      pfam10320
      Location:22 → 278
      7TM_GPCR_Srsx; Serpentine type 7TM GPCR chemoreceptor Srsx
      cd14964
      Location:46 → 71
      7tm_GPCRs; TM helix 2 [structural motif]
    Nucleotide Protein
    Heading Accession and Version

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