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    CG3594 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 37964, updated on 9-Dec-2024

    Summary

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    Official Symbol
    CG3594provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0035063
    Locus tag
    Dmel_CG3594
    See related
    AllianceGenome:FB:FBgn0035063
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    cg3594; Dmel\CG3594; Eap
    Summary
    Predicted to enable mRNA binding activity. [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
    NEW
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    Genomic context

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    See CG3594 in Genome Data Viewer
    Location:
    60E1-60E1; 2-107 cM
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2R NT_033778.4 (24780917..24781779)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2R NT_033778.3 (20668440..20669302)

    Chromosome 2R - NT_033778.4Genomic Context describing neighboring genes Neighboring gene antisense RNA:CR44067 Neighboring gene eggless Neighboring gene Larval cuticle protein 9 Neighboring gene Tyrosyl-tRNA synthetase, mitochondrial Neighboring gene uncharacterized protein Neighboring gene kenny Neighboring gene Rhythmically expressed gene 5

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A high-throughput pipeline for the production of synthetic antibodies for analysis of ribonucleoprotein complexes. Na H, et al. RNA, 2016 Apr. PMID 26847261, Free PMC Article
    2. Selection for cold resistance alters gene transcript levels in Drosophila melanogaster. Telonis-Scott M, et al. J Insect Physiol, 2009 Jun. PMID 19232407
    3. The drosophila melanogaster genome: translation factors and RNA binding proteins. Lasko P. J Cell Biol, 2000 Jul 24. PMID 10908586, Free PMC Article
    4. A gain-of-function screen identifying genes required for vein formation in the Drosophila melanogaster wing. Molnar C, et al. Genetics, 2006 Nov. PMID 16980395, Free PMC Article
    5. Comparative interactome analysis of α-arrestin families in human and Drosophila. Lee KT, et al. Elife, 2024 Jan 25. PMID 38270169, Free PMC Article

    See all (28) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables RNA binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables RNA strand annealing activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables RNA strand-exchange activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables mRNA binding ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    enables ribosomal small subunit binding IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Process Evidence Code Pubs
    involved_in eukaryotic translation initiation factor 4F complex assembly IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    involved_in formation of translation preinitiation complex IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

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    Preferred Names
    uncharacterized protein
    Names
    CG3594-PA
    Exu-associated protein

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033778.4 Reference assembly

      Range
      24780917..24781779
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_079131.3 → NP_523855.1  uncharacterized protein Dmel_CG3594 [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_523855.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9W108
      Related
      FBpp0072281
      Conserved Domains (1) summary
      cd12298
      Location:114 → 184
      RRM3_Prp24; RNA recognition motif 3 in fungal pre-messenger RNA splicing protein 24 (Prp24) and similar proteins
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q8SX67 Q8SX67
    Q9W108 Q9W108

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

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