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    • Showing Current items.

    cta concertina [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 3355131, updated on 9-Dec-2024

    Summary

    Official Symbol
    ctaprovided by FlyBase
    Official Full Name
    concertinaprovided by FlyBase
    Primary source
    FLYBASE:FBgn0000384
    Locus tag
    Dmel_CG17678
    See related
    AllianceGenome:FB:FBgn0000384
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    CG17678; CG40010; conc; Concertina; Cta; Dmel\CG17678; Galpha; Galpha12/13; Galpha[[12/13]]; GNA12/13; mat(2)cta; mat(2)fog
    Summary
    Predicted to enable D5 dopamine receptor binding activity; G-protein beta/gamma-subunit complex binding activity; and GTPase activity. Involved in several processes, including gastrulation; mesectoderm development; and regulation of embryonic development. Located in plasma membrane. Is expressed in several structures, including female germline cell; mesoderm; and organism subdivision. Orthologous to human GNA12 (G protein subunit alpha 12) and GNA13 (G protein subunit alpha 13). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
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    Genomic context

    See cta in Genome Data Viewer
    Location:
    40F7-40F7; 2-54 cM
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2L NT_033779.5 (22981816..22992951)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2L NT_033779.4 (22874548..22885683)

    Chromosome 2L - NT_033779.5Genomic Context describing neighboring genes Neighboring gene light Neighboring gene pseudo Neighboring gene Chitinase 10 Neighboring gene Spf45

    Genomic regions, transcripts, and products

    Pathways from PubChem

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    • Annotated by Drosophila Heterochromatin Genome Project, Lawrence Berkeley National Lab, http://www.dhgp.org

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables D5 dopamine receptor binding IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables G protein activity TAS
    Traceable Author Statement
    more info
    PubMed 
    enables G protein-coupled receptor binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables G-protein beta/gamma-subunit complex binding IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables G-protein beta/gamma-subunit complex binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables GTPase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables GTPase activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables GTPase activity ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    enables GTPase regulator activity TAS
    Traceable Author Statement
    more info
    PubMed 
    enables guanyl nucleotide binding IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    involved_in G protein-coupled receptor signaling pathway IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in G protein-coupled receptor signaling pathway TAS
    Traceable Author Statement
    more info
    PubMed 
    involved_in Rho protein signal transduction IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in Rho protein signal transduction IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in actin-mediated cell contraction IGI
    Inferred from Genetic Interaction
    more info
    PubMed 
    involved_in adenylate cyclase-modulating G protein-coupled receptor signaling pathway IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in apical constriction involved in gastrulation IGI
    Inferred from Genetic Interaction
    more info
    PubMed 
    involved_in convergent extension involved in gastrulation IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in establishment or maintenance of cytoskeleton polarity involved in gastrulation IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in gastrulation involving germ band extension IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in mesectoderm development IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in regulation of embryonic cell shape IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in regulation of gastrulation IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in regulation of myosin II filament organization IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    Component Evidence Code Pubs
    is_active_in brush border membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    is_active_in cytoplasm IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    is_active_in cytosol TAS
    Traceable Author Statement
    more info
    PubMed 
    part_of heterotrimeric G-protein complex IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    part_of heterotrimeric G-protein complex ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    located_in plasma membrane IDA
    Inferred from Direct Assay
    more info
    PubMed 

    General protein information

    Preferred Names
    concertina
    Names
    CG17678-PA
    CG17678-PB
    Galpha[[12/13]] subunit
    cta-PA
    cta-PB

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033779.5 Reference assembly

      Range
      22981816..22992951
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001273767.1NP_001260696.1  concertina, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001260696.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      P25157, Q7PL79, Q9U3X3
      UniProtKB/TrEMBL
      M9PDM5
      Conserved Domains (2) summary
      cd00066
      Location:133451
      G-alpha; Alpha subunit of G proteins (guanine nucleotide binding)
      smart00275
      Location:112455
      G_alpha; G protein alpha subunit
    2. NM_001042956.2NP_001036421.1  concertina, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001036421.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      P25157, Q7PL79, Q9U3X3
      UniProtKB/TrEMBL
      M9PDM5
      Conserved Domains (2) summary
      cd00066
      Location:133451
      G-alpha; Alpha subunit of G proteins (guanine nucleotide binding)
      smart00275
      Location:112455
      G_alpha; G protein alpha subunit