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    MED1 Mediator complex subunit 1 [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 40403, updated on 9-Dec-2024

    Summary

    Official Symbol
    MED1provided by FlyBase
    Official Full Name
    Mediator complex subunit 1provided by FlyBase
    Primary source
    FLYBASE:FBgn0037109
    Locus tag
    Dmel_CG7162
    See related
    AllianceGenome:FB:FBgn0037109
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    CG7162; Dmel\CG7162; dTRAP220; FBgn0037109; Med1; Med1/SOP3/TRAP220; Trap220
    Summary
    Enables transcription coregulator activity. Involved in positive regulation of transcription by RNA polymerase II. Part of mediator complex. Is expressed in organism. Orthologous to human MED1 (mediator complex subunit 1). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    NEW
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    Try the new Transcript table

    Genomic context

    See MED1 in Genome Data Viewer
    Location:
    78E1-78E1; 3-47 cM
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3L NT_037436.4 (21628325..21634446, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3L NT_037436.3 (21621425..21627546, complement)

    Chromosome 3L - NT_037436.4Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene ALG11, alpha-1,2-mannosyltransferase Neighboring gene antisense RNA:CR45955 Neighboring gene Orosomucoid 1-like Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

    Pathways from PubChem

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables transcription coregulator activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables transcription coregulator activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables transcription coregulator activity IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    enables transcription coregulator activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    PubMed 
    Component Evidence Code Pubs
    part_of mediator complex IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    part_of mediator complex IC
    Inferred by Curator
    more info
    PubMed 
    part_of mediator complex IEA
    Inferred from Electronic Annotation
    more info
     
    part_of mediator complex IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    part_of mediator complex ISS
    Inferred from Sequence or Structural Similarity
    more info
    PubMed 
    located_in nucleus IC
    Inferred by Curator
    more info
    PubMed 

    General protein information

    Preferred Names
    mediator complex subunit 1
    Names
    CG7162-PA
    CG7162-PB
    CG7162-PC
    MED1-PA
    MED1-PB
    MED1-PC
    mediator

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_037436.4 Reference assembly

      Range
      21628325..21634446 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001275254.1NP_001262183.1  mediator complex subunit 1, isoform C [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001262183.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      C8VV55, M9PII7
      Conserved Domains (1) summary
      pfam10744
      Location:75431
      Med1; Mediator of RNA polymerase II transcription subunit 1
    2. NM_141084.3NP_649341.1  mediator complex subunit 1, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_649341.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      B5RJH3, Q9GYW7, Q9VP05
      Related
      FBpp0078118
      Conserved Domains (1) summary
      pfam10744
      Location:75431
      Med1; Mediator of RNA polymerase II transcription subunit 1
    3. NM_001202224.2NP_001189153.1  mediator complex subunit 1, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001189153.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      C8VV55, H8F4P0
      Conserved Domains (1) summary
      pfam10744
      Location:75431
      Med1; Mediator of RNA polymerase II transcription subunit 1