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    phtm phantom [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 32857, updated on 17-Dec-2024

    Summary

    Official Symbol
    phtmprovided by FlyBase
    Official Full Name
    phantomprovided by FlyBase
    Primary source
    FLYBASE:FBgn0004959
    Locus tag
    Dmel_CG6578
    See related
    AllianceGenome:FB:FBgn0004959
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    306a1; CG6578; Cyp306a1; CYP306A1; Cyp306a1-Dm; Dmel\CG6578; exo; phm; Phm; ptm
    Summary
    Enables ecdysteroid 25-hydroxylase activity. Involved in border follicle cell migration; ecdysone biosynthetic process; and embryonic development via the syncytial blastoderm. Located in endoplasmic reticulum. Is expressed in several structures, including antennal anlage; epithelium; head epidermis primordium; mesoderm; and neurohemal organ. Human ortholog(s) of this gene implicated in several diseases, including artery disease (multiple); carcinoma (multiple); drug dependence (multiple); glucose metabolism disease (multiple); and hematologic cancer (multiple). Orthologous to several human genes including CYP2R1 (cytochrome P450 family 2 subfamily R member 1). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See phtm in Genome Data Viewer
    Location:
    17D1-17D1; 1-60 cM
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) X NC_004354.4 (18685766..18688433)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) X NC_004354.3 (18579799..18582466)

    Chromosome X - NC_004354.4Genomic Context describing neighboring genes Neighboring gene long non-coding RNA:CR45710 Neighboring gene long non-coding RNA:CR44707 Neighboring gene Cytochrome P450 18a1 Neighboring gene Cholecystokinin-like receptor at 17D1 Neighboring gene Cytochrome P450 308a1

    Genomic regions, transcripts, and products

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Pathways from PubChem

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Gene Ontology Provided by FlyBase

    Process Evidence Code Pubs
    involved_in border follicle cell migration IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in ecdysone biosynthetic process IDA
    Inferred from Direct Assay
    more info
    PubMed 
    involved_in ecdysone biosynthetic process IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in embryonic development via the syncytial blastoderm IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in oogenesis IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in organic acid metabolic process IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in xenobiotic metabolic process IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Component Evidence Code Pubs
    is_active_in cytoplasm IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in endoplasmic reticulum IDA
    Inferred from Direct Assay
    more info
    PubMed 
    is_active_in intracellular membrane-bounded organelle IBA
    Inferred from Biological aspect of Ancestor
    more info
     

    General protein information

    Preferred Names
    phantom
    Names
    CG6578-PA
    CG6578-PB
    cytochrome P450
    exocephalon
    phtm-PA
    phtm-PB
    NP_001285414.1
    NP_573319.1

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_004354.4 Reference assembly

      Range
      18685766..18688433
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001298485.1NP_001285414.1  phantom, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001285414.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      A5AC85, A5AC97, A5AC99, Q9VWR5
      UniProtKB/TrEMBL
      X2JG03
      Conserved Domains (1) summary
      pfam00067
      Location:49555
      p450; Cytochrome P450
    2. NM_133091.3NP_573319.1  phantom, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_573319.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      A5AC85, A5AC97, A5AC99, Q9VWR5
      UniProtKB/TrEMBL
      X2JG03
      Related
      FBpp0074374
      Conserved Domains (1) summary
      pfam00067
      Location:49555
      p450; Cytochrome P450