U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    CYP709B1 cytochrome P450, family 709, subfamily B, polypeptide 1 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 819310, updated on 18-Sep-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    CYP709B1
    Official Full Name
    cytochrome P450, family 709, subfamily B, polypeptide 1
    Primary source
    TAIR:AT2G46960
    Locus tag
    AT2G46960
    See related
    Araport:AT2G46960
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    ''cytochrome P450; cytochrome P450; F14M4.21; family 709; polypeptide 1; polypeptide 1''; subfamily B
    Summary
    member of CYP709B
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See CYP709B1 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    5
    Sequence:
    Chromosome: 2; NC_003071.7 (19292035..19294375, complement)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene fold protein Neighboring gene ncRNA Neighboring gene cytochrome P450, family 709, subfamily B, polypeptide 2 Neighboring gene phytochrome interacting factor 3-like 1 Neighboring gene asynaptic protein Neighboring gene ncRNA

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_003071.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

    GeneRIFs: Gene References Into Functions

    Pathways from PubChem

    Go to the top of the page

    General gene information

    Go to the top of the page Help
    NM_130264.2
    NM_180134.2

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables heme binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables iron ion binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in mitochondrion ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

    Go to the top of the page Help
    Preferred Names
    cytochrome P450, family 709, subfamily B, polypeptide 1
    NP_566092.1
    • ''cytochrome P450, family 709, subfamily B, polypeptide 1'' (CYP709B1); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: embryo; EXPRESSED DURING: C globular stage; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 709, subfamily B, polypeptide 2 (TAIR:AT2G46950.1); Has 32614 Blast hits to 32513 proteins in 1675 species: Archae - 82; Bacteria - 5949; Metazoa - 11217; Fungi - 5903; Plants - 7855; Viruses - 3; Other Eukaryotes - 1605 (source: NCBI BLink).
    NP_850465.1
    • ''cytochrome P450, family 709, subfamily B, polypeptide 1'' (CYP709B1); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; EXPRESSED IN: embryo; EXPRESSED DURING: C globular stage; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 709, subfamily B, polypeptide 2 (TAIR:AT2G46950.1); Has 32280 Blast hits to 32204 proteins in 1668 species: Archae - 82; Bacteria - 5852; Metazoa - 11147; Fungi - 5837; Plants - 7783; Viruses - 3; Other Eukaryotes - 1576 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      19292035..19294375 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_130264.2 → NP_566092.1  cytochrome P450, family 709, subfamily B, polypeptide 1 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_566092.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      O80728, Q9ASR3
      UniProtKB/TrEMBL
      A0A178VQG9, A0A5S9X857
      Conserved Domains (1) summary
      cd20641
      Location:82 → 511
      CYP709; cytochrome P450 family 709

    2. NM_180134.2 → NP_850465.1  cytochrome P450, family 709, subfamily B, polypeptide 1 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_850465.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      F4IK47
      Conserved Domains (1) summary
      cd20641
      Location:1 → 395
      CYP709; cytochrome P450 family 709
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9ASR3.1

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.