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    Translation machinery associated TMA7 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 820849, updated on 18-Sep-2024

    Summary

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    Official Full Name
    Translation machinery associated TMA7
    Primary source
    TAIR:AT3G16040
    Locus tag
    AT3G16040
    See related
    Araport:AT3G16040
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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    Genomic context

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    Location:
    chromosome: 3
    Exon count:
    4
    Sequence:
    Chromosome: 3; NC_003074.8 (5443081..5443952)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene MAR binding filament-like protein 1 Neighboring gene Pentatricopeptide repeat (PPR-like) superfamily protein Neighboring gene F-box associated ubiquitination effector protein Neighboring gene lectin protein kinase family protein Neighboring gene ncRNA Neighboring gene pyridoxine biosynthesis 1.2 Neighboring gene ATP binding microtubule motor family protein Neighboring gene LOW protein: ATP-dependent RNA helicase-like protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_112474.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
    		  

    General protein information

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    Preferred Names
    Translation machinery associated TMA7
    NP_566533.1
    • Translation machinery associated TMA7; CONTAINS InterPro DOMAIN/s: Translation machinery associated TMA7 (InterPro:IPR015157); BEST Arabidopsis thaliana protein match is: Translation machinery associated TMA7 (TAIR:AT1G15270.1); Has 382 Blast hits to 382 proteins in 132 species: Archae - 0; Bacteria - 0; Metazoa - 202; Fungi - 86; Plants - 65; Viruses - 0; Other Eukaryotes - 29 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      5443081..5443952
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_112474.3 → NP_566533.1  Translation machinery associated TMA7 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_566533.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VH85, A0A384KMR6, A0A5S9XE23, Q1EBS5, Q8LCA9
      Conserved Domains (1) summary
      pfam09072
      Location:3 → 64
      TMA7; Translation machinery associated TMA7
    Nucleotide Protein
    Heading Accession and Version

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