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    scpl18 serine carboxypeptidase-like 18 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 840248, updated on 18-Sep-2024

    Summary

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    Official Symbol
    scpl18
    Official Full Name
    serine carboxypeptidase-like 18
    Primary source
    TAIR:AT1G33540
    Locus tag
    AT1G33540
    See related
    Araport:AT1G33540
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F10C21.18; F10C21_18; serine carboxypeptidase-like 18
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    Genomic context

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    See scpl18 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    12
    Sequence:
    Chromosome: 1; NC_003070.9 (12162112..12164714, complement)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene D111/G-patch domain-containing protein Neighboring gene F-box family protein Neighboring gene pseudo Neighboring gene Disease resistance protein (CC-NBS-LRR class) family

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    Pathways from PubChem

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    General gene information

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    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables serine-type carboxypeptidase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in proteolysis IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in extracellular region ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    serine carboxypeptidase-like 18
    NP_001319134.1
    • serine carboxypeptidase-like 18 (scpl18); FUNCTIONS IN: serine-type carboxypeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Peptidase S10, serine carboxypeptidase (InterPro:IPR001563); BEST Arabidopsis thaliana protein match is: serine carboxypeptidase-like 7 (TAIR:AT3G10450.1); Has 3653 Blast hits to 3603 proteins in 397 species: Archae - 0; Bacteria - 261; Metazoa - 616; Fungi - 829; Plants - 1537; Viruses - 0; Other Eukaryotes - 410 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      12162112..12164714 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001333051.1 → NP_001319134.1  serine carboxypeptidase-like 18 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      F4HR86, Q9C7Z9
      UniProtKB/TrEMBL
      A0A7G2DXQ5

    2. NM_001333052.1 → NP_001321942.1  serine carboxypeptidase-like 18 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8ASK8, A0A7G2DXQ5
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9C7Z9.2

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