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    uncharacterized protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 831203, updated on 18-Sep-2024

    Summary

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    Official Full Name
    uncharacterized protein
    Primary source
    TAIR:AT5G13590
    Locus tag
    AT5G13590
    See related
    Araport:AT5G13590
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    T6I14.8
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    Genomic context

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    Location:
    chromosome: 5
    Exon count:
    7
    Sequence:
    Chromosome: 5; NC_003076.8 (4373239..4379401, complement)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene decapping 2 Neighboring gene ABC-2 type transporter family protein Neighboring gene Phototropic-responsive NPH3 family protein Neighboring gene sporulation RMD1-like protein, putative (DUF155)

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The temperature sensor TWA1 is required for thermotolerance in Arabidopsis. Bohn L, et al. Nature, 2024 May. PMID 38750356, Free PMC Article
    2. Proteomic analyses identify a diverse array of nuclear processes affected by small ubiquitin-like modifier conjugation in Arabidopsis. Miller MJ, et al. Proc Natl Acad Sci U S A, 2010 Sep 21. PMID 20813957, Free PMC Article
    3. Interactome analysis reveals versatile functions of Arabidopsis COLD SHOCK DOMAIN PROTEIN 3 in RNA processing within the nucleus and cytoplasm. Kim MH, et al. Cell Stress Chaperones, 2013 Jul. PMID 23334891, Free PMC Article
    4. Arabidopsis plasmodesmal proteome. Fernandez-Calvino L, et al. PLoS One, 2011 Apr 20. PMID 21533090, Free PMC Article
    5. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. The temperature sensor TWA1 is required for thermotolerance in Arabidopsis.
      Title: The temperature sensor TWA1 is required for thermotolerance in Arabidopsis.
    Submit: New GeneRIF Correction

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    NM_001343278.1
    NM_001343279.1
    NM_001343280.1
    NM_001343281.1
    NM_001343282.1
    NM_121362.6

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  
    located_in plasmodesma HDA PubMed 

    General protein information

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    Preferred Names
    uncharacterized protein
    NP_196863.5
    • unknown protein; Has 150 Blast hits to 121 proteins in 42 species: Archae - 0; Bacteria - 8; Metazoa - 80; Fungi - 5; Plants - 17; Viruses - 0; Other Eukaryotes - 40 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      4373239..4379401 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_121362.6 → NP_196863.5  uncharacterized protein AT5G13590 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_196863.5

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UHN1, A0A5S9Y4H7, F4K402

    2. NM_001343279.1 → NP_001331743.1  uncharacterized protein AT5G13590 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UHN1, A0A5S9Y4H7, F4K402

    3. NM_001343281.1 → NP_001331739.1  uncharacterized protein AT5G13590 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UHZ8, A0A1P8BET4

    4. NM_001343282.1 → NP_001331740.1  uncharacterized protein AT5G13590 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UHZ8, A0A1P8BES5

    5. NM_001343280.1 → NP_001331741.1  uncharacterized protein AT5G13590 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UHN1, A0A5S9Y4H7, F4K402

    6. NM_001343278.1 → NP_001331742.1  uncharacterized protein AT5G13590 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UHN1, A0A5S9Y4H7, F4K402
    Nucleotide Protein
    Heading Accession and Version

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