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    coiled-coil protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 834567, updated on 18-Sep-2024

    Summary

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    Official Full Name
    coiled-coil protein
    Primary source
    TAIR:AT5G45310
    Locus tag
    AT5G45310
    See related
    Araport:AT5G45310
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    K9E15.9; K9E15_9
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    Genomic context

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    Location:
    chromosome: 5
    Exon count:
    4
    Sequence:
    Chromosome: 5; NC_003076.8 (18359275..18361213, complement)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene beta-amylase 2 Neighboring gene ncRNA Neighboring gene late embryogenesis abundant protein Neighboring gene decapping 5-like protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_001344607.1
    NM_123899.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in Golgi apparatus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    coiled-coil protein
    NP_568641.1
    • unknown protein; LOCATED IN: endomembrane system; EXPRESSED IN: stem, inflorescence meristem, root, leaf; EXPRESSED DURING: LP.04 four leaves visible; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      18359275..18361213 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_123899.4 → NP_568641.1  coiled-coil protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_568641.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UBR9, A0A5S9YB89, Q94JR2
      Conserved Domains (2) summary
      TIGR02169
      Location:89 → 155
      SMC_prok_A; chromosome segregation protein SMC, primarily archaeal type
      TIGR04523
      Location:89 → 234
      Mplasa_alph_rch; helix-rich Mycoplasma protein

    2. NM_001344607.1 → NP_001330291.1  coiled-coil protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UBR9, A0A5S9YB89, Q94JR2
      Conserved Domains (2) summary
      TIGR02169
      Location:89 → 155
      SMC_prok_A; chromosome segregation protein SMC, primarily archaeal type
      TIGR04523
      Location:89 → 234
      Mplasa_alph_rch; helix-rich Mycoplasma protein
    Nucleotide Protein
    Heading Accession and Version

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