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    RPA70C Replication factor-A protein 1-like protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 834576, updated on 18-Sep-2024

    Summary

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    Official Symbol
    RPA70C
    Official Full Name
    Replication factor-A protein 1-like protein
    Primary source
    TAIR:AT5G45400
    Locus tag
    AT5G45400
    See related
    Araport:AT5G45400
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    ATRPA70C; MFC19.7; MFC19_7; Replication Protein A 1C; RPA1C
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    Genomic context

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    See RPA70C in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    2
    Sequence:
    Chromosome: 5; NC_003076.8 (18398832..18402284)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene urea-proton symporter DEGRADATION OF UREA 3 (DUR3) Neighboring gene CLP protease P4 Neighboring gene zinc finger B-box protein Neighboring gene Duplicated homeodomain-like superfamily protein Neighboring gene Protein kinase superfamily protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_123908.2

    Gene Ontology Provided by TAIR

    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    Replication factor-A protein 1-like protein
    NP_199353.1
    • RPA70C; FUNCTIONS IN: DNA binding, zinc ion binding, nucleic acid binding; INVOLVED IN: DNA replication; LOCATED IN: nucleus; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold (InterPro:IPR012340), Nucleic acid binding, OB-fold, tRNA/helicase-type (InterPro:IPR004365), Replication factor A, C-terminal (InterPro:IPR013955), Replication factor-a protein 1 Rpa1 (InterPro:IPR004591), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Zinc finger, CCHC-type (InterPro:IPR001878), Replication factor-A protein 1, N-terminal (InterPro:IPR007199); BEST Arabidopsis thaliana protein match is: Replication factor-A protein 1-related (TAIR:AT4G19130.1); Has 1172 Blast hits to 939 proteins in 244 species: Archae - 33; Bacteria - 8; Metazoa - 314; Fungi - 240; Plants - 399; Viruses - 0; Other Eukaryotes - 178 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      18398832..18402284
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_123908.2 → NP_199353.1  Replication factor-A protein 1-like protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_199353.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9FHJ6
      UniProtKB/TrEMBL
      A0A5S9YBS1, A0A654G8I4
      Conserved Domains (1) summary
      TIGR00617
      Location:2 → 739
      rpa1; replication factor-a protein 1 (rpa1)
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9FHJ6.1

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