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    HSFB2A heat shock transcription factor B2A [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 836322, updated on 18-Sep-2024

    Summary

    Official Symbol
    HSFB2A
    Official Full Name
    heat shock transcription factor B2A
    Primary source
    TAIR:AT5G62020
    Locus tag
    AT5G62020
    See related
    Araport:AT5G62020
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    ARABIDOPSIS THALIANA HEAT SHOCK TRANSCRIPTION FACTOR B2A; ARABIDOPSIS THALIANA HEAT SHOCK TRANSCRIPTION FACTOR B2A; AT-HSFB2A; heat shock transcription factor B2A; heat shock transcription factor B2A; MTG10.7; MTG10_7
    Summary
    member of Heat Stress Transcription Factor (Hsf) family
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    Genomic context

    See HSFB2A in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    2
    Sequence:
    Chromosome: 5; NC_003076.8 (24915807..24917643)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene auxin response factor 2 Neighboring gene diphthamide synthesis DPH2 family protein Neighboring gene PEBP (phosphatidylethanolamine-binding protein) family protein Neighboring gene inner membrane OXA1-like protein

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    General gene information

    NM_125595.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    PubMed 
    enables transcription cis-regulatory region binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    Process Evidence Code Pubs
    involved_in regulation of DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
     

    General protein information

    Preferred Names
    heat shock transcription factor B2A
    NP_201008.2
    • heat shock transcription factor B2A (HSFB2A); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to chitin; LOCATED IN: nucleus; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Heat shock factor (HSF)-type, DNA-binding (InterPro:IPR000232); BEST Arabidopsis thaliana protein match is: winged-helix DNA-binding transcription factor family protein (TAIR:AT4G11660.1); Has 2147 Blast hits to 2134 proteins in 224 species: Archae - 0; Bacteria - 0; Metazoa - 368; Fungi - 473; Plants - 782; Viruses - 0; Other Eukaryotes - 524 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      24915807..24917643
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_125595.4NP_201008.2  heat shock transcription factor B2A [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_201008.2

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q0WMX0, Q9SCW4
      UniProtKB/TrEMBL
      A0A178UCK7, A0A384KDZ5, C0SVV5
      Conserved Domains (1) summary
      smart00415
      Location:21113
      HSF; heat shock factor