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    Tmem268 transmembrane protein 268 [ Rattus norvegicus (Norway rat) ]

    Gene ID: 298104, updated on 9-Dec-2024

    Summary

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    Official Symbol
    Tmem268provided by RGD
    Official Full Name
    transmembrane protein 268provided by RGD
    Primary source
    RGD:1304595
    See related
    EnsemblRapid:ENSRNOG00000008712 AllianceGenome:RGD:1304595
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Also known as
    RGD1304595
    Summary
    Orthologous to human TMEM268 (transmembrane protein 268). [provided by Alliance of Genome Resources, Dec 2024]
    Expression
    Biased expression in Adrenal (RPKM 166.4), Spleen (RPKM 70.9) and 9 other tissues See more
    Orthologs
    human mouse all
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    Genomic context

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    See Tmem268 in Genome Data Viewer
    Location:
    5q24
    Exon count:
    13
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 5 NC_086023.1 (81990314..82016970)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 5 NC_051340.1 (76974827..77001457)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 5 NC_005104.4 (79380987..79407435)

    Chromosome 5 - NC_086023.1Genomic Context describing neighboring genes Neighboring gene H/ACA ribonucleoprotein complex subunit 3 pseudogene Neighboring gene ATPase H+ transporting V1 subunit G1 Neighboring gene uncharacterized LOC102553131 Neighboring gene testis expressed 48

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
    • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
    • BioProject: PRJNA238328
    • Publication: PMID 24510058
    • Analysis date: Mon Jun 6 17:44:12 2016

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    General protein information

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    Preferred Names
    transmembrane protein 268
    Names
    transmembrane protein C9orf91 homolog

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001106661.1 → NP_001100131.1  transmembrane protein 268

      See identical proteins and their annotated locations for NP_001100131.1

      Status: PROVISIONAL

      Source sequence(s)
      CH473978
      UniProtKB/TrEMBL
      A6J7Y8, D3ZSU8
      Conserved Domains (1) summary
      pfam14800
      Location:39 → 328
      DUF4481; Domain of unknown function (DUF4481)

    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086023.1 Reference GRCr8

      Range
      81990314..82016970
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_017593253.3 → XP_017448742.1  transmembrane protein 268 isoform X1

      UniProtKB/TrEMBL
      A6J7Y8, D3ZSU8
      Conserved Domains (1) summary
      pfam14800
      Location:39 → 328
      DUF4481; Domain of unknown function (DUF4481)

    2. XM_039109475.2 → XP_038965403.1  transmembrane protein 268 isoform X1

      UniProtKB/TrEMBL
      A6J7Y8, D3ZSU8
      Conserved Domains (1) summary
      pfam14800
      Location:39 → 328
      DUF4481; Domain of unknown function (DUF4481)

    3. XM_017593252.3 → XP_017448741.1  transmembrane protein 268 isoform X1

      UniProtKB/TrEMBL
      A6J7Y8, D3ZSU8
      Related
      ENSRNOP00000011799.4, ENSRNOT00000011799.6
      Conserved Domains (1) summary
      pfam14800
      Location:39 → 328
      DUF4481; Domain of unknown function (DUF4481)

    4. XM_017593255.3 → XP_017448744.1  transmembrane protein 268 isoform X1

      UniProtKB/TrEMBL
      A6J7Y8, D3ZSU8
      Conserved Domains (1) summary
      pfam14800
      Location:39 → 328
      DUF4481; Domain of unknown function (DUF4481)

    5. XM_063287355.1 → XP_063143425.1  transmembrane protein 268 isoform X4

    6. XM_039109476.2 → XP_038965404.1  transmembrane protein 268 isoform X2

      Conserved Domains (1) summary
      pfam14800
      Location:39 → 278
      DUF4481; Domain of unknown function (DUF4481)

    7. XM_063287353.1 → XP_063143423.1  transmembrane protein 268 isoform X1

      UniProtKB/TrEMBL
      A6J7Y8, D3ZSU8

    8. XM_063287354.1 → XP_063143424.1  transmembrane protein 268 isoform X1

      UniProtKB/TrEMBL
      A6J7Y8, D3ZSU8

    9. XM_039109477.2 → XP_038965405.1  transmembrane protein 268 isoform X3

      Conserved Domains (1) summary
      pfam14800
      Location:1 → 204
      DUF4481; Domain of unknown function (DUF4481)
    Nucleotide Protein Strain
    Heading Accession and Version

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