U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    Hrct1 histidine rich carboxyl terminus 1 [ Mus musculus (house mouse) ]

    Gene ID: 100039781, updated on 27-Nov-2024

    Summary

    Official Symbol
    Hrct1provided by MGI
    Official Full Name
    histidine rich carboxyl terminus 1provided by MGI
    Primary source
    MGI:MGI:1917945
    See related
    Ensembl:ENSMUSG00000071001 AllianceGenome:MGI:1917945
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    3830408D24Rik
    Summary
    Predicted to be located in membrane. Orthologous to human HRCT1 (histidine rich carboxyl terminus 1). [provided by Alliance of Genome Resources, Nov 2024]
    Orthologs
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See Hrct1 in Genome Data Viewer
    Location:
    4 A5; 4 23.05 cM
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 4 NC_000070.7 (43727198..43728110)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 4 NC_000070.6 (43727198..43728110)

    Chromosome 4 - NC_000070.7Genomic Context describing neighboring genes Neighboring gene olfactory receptor family 13 subfamily E member 8 Neighboring gene olfactory receptor family 13 subfamily J member 1 Neighboring gene STARR-seq mESC enhancer starr_10058 Neighboring gene small regulatory polypeptide of amino acid response Neighboring gene STARR-seq mESC enhancer starr_10059 Neighboring gene predicted gene, 54217

    Genomic regions, transcripts, and products

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)

    General gene information

    Markers

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
     
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
     
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    histidine-rich carboxyl terminus protein 1

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_027511.1NP_081787.1  histidine-rich carboxyl terminus protein 1

      See identical proteins and their annotated locations for NP_081787.1

      Status: VALIDATED

      Source sequence(s)
      AK014425, AL824712, BC096573
      Consensus CDS
      CCDS51169.1
      UniProtKB/Swiss-Prot
      A2ANK5, Q9D6B9
      Related
      ENSMUSP00000092727.4, ENSMUST00000095109.5
      Conserved Domains (1) summary
      pfam15758
      Location:3081
      HRCT1; Histidine-rich carboxyl terminus protein 1

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000070.7 Reference GRCm39 C57BL/6J

      Range
      43727198..43728110
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)