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    them6 thioesterase superfamily member 6 [ Danio rerio (zebrafish) ]

    Gene ID: 569944, updated on 9-Dec-2024

    Summary

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    Official Symbol
    them6provided by ZNC
    Official Full Name
    thioesterase superfamily member 6provided by ZNC
    Primary source
    ZFIN:ZDB-GENE-070912-340
    See related
    Ensembl:ENSDARG00000100260 AllianceGenome:ZFIN:ZDB-GENE-070912-340
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Also known as
    wu:fb81b06; si:ch73-52e5.1
    Summary
    Predicted to be located in membrane. Orthologous to human THEM6 (thioesterase superfamily member 6). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See them6 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCz11 (GCF_000002035.6) 2 NC_007113.7 (51098638..51109476, complement)
    105 previous assembly GRCz10 (GCF_000002035.5) 2 NC_007113.6 (51364418..51375256, complement)

    Chromosome 2 - NC_007113.7Genomic Context describing neighboring genes Neighboring gene finTRIM family, member 67 Neighboring gene si:ch73-52e5.2 Neighboring gene leucine rich repeat containing 24 Neighboring gene polymeric immunoglobulin receptor-like 4.2

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    Bibliography

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    Related articles in PubMed

    1. RFX transcription factors are essential for hearing in mice. Elkon R, et al. Nat Commun, 2015 Oct 15. PMID 26469318, Free PMC Article
    2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by ZFIN

    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    Protein THEM6-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001122704.1 → NP_001116176.1  Protein THEM6-like

      Status: PROVISIONAL

      Source sequence(s)
      CT027572
      UniProtKB/TrEMBL
      A0A0R4IMG3, A0A8M1NI46
      Related
      ENSDARP00000135990.1, ENSDART00000168286.2
      Conserved Domains (1) summary
      pfam13279
      Location:53 → 183
      4HBT_2; Thioesterase-like superfamily

    RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007113.7 Reference GRCz11 Primary Assembly

      Range
      51098638..51109476 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein Strain
    Heading Accession and Version

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