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    morc3a MORC family CW-type zinc finger 3a [ Danio rerio (zebrafish) ]

    Gene ID: 553447, updated on 9-Dec-2024

    Summary

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    Official Symbol
    morc3aprovided by ZNC
    Official Full Name
    MORC family CW-type zinc finger 3aprovided by ZNC
    Primary source
    ZFIN:ZDB-GENE-030131-1502
    See related
    Ensembl:ENSDARG00000056679 AllianceGenome:ZFIN:ZDB-GENE-030131-1502
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Also known as
    fb73c08; wu:fb73c08; zgc:162471
    Summary
    Predicted to enable methylated histone binding activity. Predicted to be active in PML body. Orthologous to human MORC3 (MORC family CW-type zinc finger 3). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    human mouse all
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    Genomic context

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    See morc3a in Genome Data Viewer
    Location:
    chromosome: 9
    Exon count:
    20
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCz11 (GCF_000002035.6) 9 NC_007120.7 (30558508..30576484, complement)
    105 previous assembly GRCz10 (GCF_000002035.5) 9 NC_007120.6 (30747770..30765738, complement)

    Chromosome 9 - NC_007120.7Genomic Context describing neighboring genes Neighboring gene E3 SUMO-protein ligase ZBED1 Neighboring gene chromatin assembly factor 1, subunit B Neighboring gene COMM domain containing 6 Neighboring gene TBC1 domain family, member 4

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    Bibliography

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    Related articles in PubMed

    1. RFX transcription factors are essential for hearing in mice. Elkon R, et al. Nat Commun, 2015 Oct 15. PMID 26469318, Free PMC Article
    2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article
    3. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by ZFIN

    Function Evidence Code Pubs
    enables ATP hydrolysis activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables metal ion binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables methylated histone binding IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    is_active_in PML body IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    is_active_in nucleus IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

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    Preferred Names
    MORC family CW-type zinc finger protein 3a
    Names
    morc3

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001089366.1 → NP_001082835.1  MORC family CW-type zinc finger protein 3a

      See identical proteins and their annotated locations for NP_001082835.1

      Status: PROVISIONAL

      Source sequence(s)
      BC135000
      UniProtKB/TrEMBL
      A4QN72
      Related
      ENSDARP00000091859.3, ENSDART00000101085.5
      Conserved Domains (2) summary
      pfam07496
      Location:413 → 458
      zf-CW; CW-type Zinc Finger
      cl00075
      Location:29 → 148
      HATPase_c; Histidine kinase-like ATPases; This family includes several ATP-binding proteins for example: histidine kinase, DNA gyrase B, topoisomerases, heat shock protein HSP90, phytochrome-like ATPases and DNA mismatch repair proteins

    RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007120.7 Reference GRCz11 Primary Assembly

      Range
      30558508..30576484 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_068223384.1 → XP_068079485.1  MORC family CW-type zinc finger protein 3a isoform X1

    Nucleotide Protein Strain
    Heading Accession and Version

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