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    plin3 perilipin 3 [ Danio rerio (zebrafish) ]

    Gene ID: 335278, updated on 9-Dec-2024

    Summary

    Official Symbol
    plin3provided by ZNC
    Official Full Name
    perilipin 3provided by ZNC
    Primary source
    ZFIN:ZDB-GENE-030131-7218
    See related
    Ensembl:ENSDARG00000013711 AllianceGenome:ZFIN:ZDB-GENE-030131-7218
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Also known as
    fl05f04; wu:fl05f04; si:rp71-61h23.4
    Summary
    Is expressed in intestine. Orthologous to human PLIN3 (perilipin 3). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
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    Genomic context

    See plin3 in Genome Data Viewer
    Location:
    chromosome: 8
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCz11 (GCF_000002035.6) 8 NC_007119.7 (19270861..19280852, complement)
    105 previous assembly GRCz10 (GCF_000002035.5) 8 NC_007119.6 (19240461..19250461, complement)

    Chromosome 8 - NC_007119.7Genomic Context describing neighboring genes Neighboring gene abhydrolase domain containing 17A, depalmitoylase b Neighboring gene zgc:77486 Neighboring gene ral guanine nucleotide dissociation stimulator-like 1 Neighboring gene macrophage expressed 1, tandem duplicate 2

    Genomic regions, transcripts, and products

    Expression

    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    General protein information

    Preferred Names
    mannose-6-phosphate receptor binding protein 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001386314.1NP_001373243.1  mannose-6-phosphate receptor binding protein 1

      Status: VALIDATED

      Source sequence(s)
      FP067410
      UniProtKB/TrEMBL
      A0A8M9QE31, F1QGJ3
      Related
      ENSDARP00000091246.4, ENSDART00000100473.5
      Conserved Domains (1) summary
      pfam03036
      Location:14411
      Perilipin; Perilipin family

    RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007119.7 Reference GRCz11 Primary Assembly

      Range
      19270861..19280852 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Reference GRCz11 ALT_DRER_TU_1

    Genomic

    1. NW_018394718.1 Reference GRCz11 ALT_DRER_TU_1

      Range
      405064..415055 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)