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    LOC100001665 fibrous sheath CABYR-binding protein [ Danio rerio (zebrafish) ]

    Gene ID: 100001665, updated on 3-Dec-2024

    Summary

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    Gene symbol
    LOC100001665
    Gene description
    fibrous sheath CABYR-binding protein
    See related
    Ensembl:ENSDARG00000073931
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Orthologs
    all
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    Genomic context

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    See LOC100001665 in Genome Data Viewer
    Location:
    chromosome: 24
    Exon count:
    12
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCz11 (GCF_000002035.6) 24 NC_007135.7 (10303100..10349091)
    105 previous assembly GRCz10 (GCF_000002035.5) 24 NC_007135.6 (10170131..10204343)

    Chromosome 24 - NC_007135.7Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC100538156 Neighboring gene POU class 6 homeobox 2 Neighboring gene OTU deubiquitinase with linear linkage specificity a Neighboring gene si:ch211-69l10.4 Neighboring gene ANKH inorganic pyrophosphate transport regulator a

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    General protein information

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    Preferred Names
    fibrous sheath CABYR-binding protein

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007135.7 Reference GRCz11 Primary Assembly

      Range
      10303100..10349091
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_068217163.1 → XP_068073264.1  fibrous sheath CABYR-binding protein isoform X1

      UniProtKB/TrEMBL
      A0A8M1PSJ7, F1QGG2
      Related
      ENSDARP00000102435.3, ENSDART00000112455.4

    2. XM_068217165.1 → XP_068073266.1  fibrous sheath CABYR-binding protein isoform X3

      Related
      ENSDARP00000115397.1, ENSDART00000141718.2

    3. XM_068217164.1 → XP_068073265.1  fibrous sheath CABYR-binding protein isoform X2

    4. XM_001341582.8 → XP_001341618.4  fibrous sheath CABYR-binding protein isoform X1

      UniProtKB/TrEMBL
      A0A8M1PSJ7, F1QGG2
      Conserved Domains (2) summary
      pfam09528
      Location:23 → 476
      Ehrlichia_rpt; Ehrlichia tandem repeat (Ehrlichia_rpt)
      pfam16218
      Location:579 → 843
      Peptidase_C101; Peptidase family C101
    Nucleotide Protein Strain
    Heading Accession and Version

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