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    her15.2 hairy and enhancer of split-related 15, tandem duplicate 2 [ Danio rerio (zebrafish) ]

    Gene ID: 359836, updated on 4-Jan-2025

    Summary

    Official Symbol
    her15.2provided by ZNC
    Official Full Name
    hairy and enhancer of split-related 15, tandem duplicate 2provided by ZNC
    Primary source
    ZFIN:ZDB-GENE-070627-1
    See related
    Ensembl:ENSDARG00000054560 AllianceGenome:ZFIN:ZDB-GENE-070627-1
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Also known as
    hes5; her15; her15b; hes5-like
    Summary
    Predicted to enable protein dimerization activity. Is expressed in central nervous system and retina. Orthologous to human HES5 (hes family bHLH transcription factor 5). [provided by Alliance of Genome Resources, Jan 2025]
    Orthologs
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    Genomic context

    See her15.2 in Genome Data Viewer
    Location:
    chromosome: 11
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCz11 (GCF_000002035.6) 11 NC_007122.7 (41994719..41996170, complement)
    105 previous assembly GRCz10 (GCF_000002035.5) 11 NC_007122.6 (41382602..41384050, complement)

    Chromosome 11 - NC_007122.7Genomic Context describing neighboring genes Neighboring gene hairy-related 2 Neighboring gene hairy and enhancer of split-related 15, tandem duplicate 1 Neighboring gene si:ch211-193l2.6 Neighboring gene uncharacterized LOC798783

    Genomic regions, transcripts, and products

    Expression

    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    Bibliography

    Pathways from PubChem

    General protein information

    Preferred Names
    hairy and enhancer of split-related 15, tandem duplicate 2
    Names
    hairy and enhancer of split-related 15.2

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001105592.2NP_001099062.1  hairy and enhancer of split-related 15, tandem duplicate 2

      See identical proteins and their annotated locations for NP_001099062.1

      Status: VALIDATED

      Source sequence(s)
      AL929185, BC153646
      UniProtKB/TrEMBL
      A8E5M4
      Related
      ENSDARP00000055705.3, ENSDART00000055706.6
      Conserved Domains (1) summary
      pfam00010
      Location:1972
      HLH; Helix-loop-helix DNA-binding domain

    RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007122.7 Reference GRCz11 Primary Assembly

      Range
      41994719..41996170 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)