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    si:dkey-66i24.7 si:dkey-66i24.7 [ Danio rerio (zebrafish) ]

    Gene ID: 569935, updated on 12-Sep-2024

    Summary

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    Official Symbol
    si:dkey-66i24.7provided by ZNC
    Official Full Name
    si:dkey-66i24.7provided by ZNC
    Primary source
    ZFIN:ZDB-GENE-130603-106
    See related
    Ensembl:ENSDARG00000096714 AllianceGenome:ZFIN:ZDB-GENE-130603-106
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Orthologs
    all
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    Genomic context

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    See si:dkey-66i24.7 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCz11 (GCF_000002035.6) 3 NC_007114.7 (31058457..31060607)
    105 previous assembly GRCz10 (GCF_000002035.5) 3 NC_007114.6 (30927536..30929609)

    Chromosome 3 - NC_007114.7Genomic Context describing neighboring genes Neighboring gene cytochrome c oxidase subunit 6A2 Neighboring gene armadillo repeat containing 5 Neighboring gene uncharacterized LOC569097 Neighboring gene elongin B

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    Bibliography

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    Related articles in PubMed

    1. Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database. Pasquier J, et al. BMC Genomics, 2016 May 18. PMID 27189481, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    General protein information

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    Preferred Names
    uncharacterized protein si:dkey-66i24.7

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007114.7 Reference GRCz11 Primary Assembly

      Range
      31058457..31060607
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_021474111.2 → XP_021329786.1  uncharacterized protein si:dkey-66i24.7

      UniProtKB/TrEMBL
      A0A8M9Q4J4, U3JAU9
      Related
      ENSDARP00000127368.1, ENSDART00000153381.2
      Conserved Domains (1) summary
      cl23759
      Location:35 → 124
      GT1; GT1, myb-like, SANT family

    Reference GRCz11 ALT_DRER_TU_1

    Genomic

    1. NW_018394534.1 Reference GRCz11 ALT_DRER_TU_1

      Range
      131345..133506
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_693350.10 → XP_698442.1  uncharacterized protein si:dkey-66i24.7

      UniProtKB/TrEMBL
      A0A8M9Q4J4, U3JAU9
      Conserved Domains (1) summary
      cl23759
      Location:35 → 124
      GT1; GT1, myb-like, SANT family
    Nucleotide Protein
    Heading Accession and Version

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