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    ucmaa upper zone of growth plate and cartilage matrix associated a [ Danio rerio (zebrafish) ]

    Gene ID: 100037325, updated on 4-Jan-2025

    Summary

    Official Symbol
    ucmaaprovided by ZNC
    Official Full Name
    upper zone of growth plate and cartilage matrix associated aprovided by ZNC
    Primary source
    ZFIN:ZDB-GENE-070410-71
    See related
    Ensembl:ENSDARG00000027799 AllianceGenome:ZFIN:ZDB-GENE-070410-71
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Also known as
    GRP2; ucma; zgc:162317
    Summary
    Predicted to be involved in embryonic skeletal system development. Predicted to act upstream of or within regulation of osteoblast differentiation. Predicted to be located in extracellular region. Predicted to be active in extracellular matrix. Is expressed in asteriscus; ceratohyal cartilage; hypobranchial cartilage; and neurocranial trabecula. Orthologous to human UCMA (upper zone of growth plate and cartilage matrix associated). [provided by Alliance of Genome Resources, Jan 2025]
    Orthologs
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    Genomic context

    See ucmaa in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCz11 (GCF_000002035.6) 4 NC_007115.7 (7841635..7850489)
    105 previous assembly GRCz10 (GCF_000002035.5) 4 NC_007115.6 (7833006..7841860)

    Chromosome 4 - NC_007115.7Genomic Context describing neighboring genes Neighboring gene thiaminase I, tandem duplicate 1 2 Neighboring gene phytanoyl-CoA 2-hydroxylase Neighboring gene minichromosome maintenance 10 replication initiation factor Neighboring gene nudix (nucleoside diphosphate linked moiety X)-type motif 5

    Genomic regions, transcripts, and products

    Expression

    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    General gene information

    Gene Ontology Provided by ZFIN

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    involved_in embryonic skeletal system development IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    acts_upstream_of_or_within regulation of osteoblast differentiation IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    is_active_in extracellular matrix IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in extracellular region IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    upper zone of growth plate and cartilage matrix associated a
    Names
    Gla-Rich Protein 2
    Grp-2

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001089481.1NP_001082950.1  upper zone of growth plate and cartilage matrix associated a precursor

      See identical proteins and their annotated locations for NP_001082950.1

      Status: PROVISIONAL

      Source sequence(s)
      BC133944
      UniProtKB/TrEMBL
      A4FVI5, F6NN07, K7NNC4
      Related
      ENSDARP00000030232.4, ENSDART00000037997.6
      Conserved Domains (1) summary
      pfam17085
      Location:1128
      UCMA; Unique cartilage matrix associated protein

    RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007115.7 Reference GRCz11 Primary Assembly

      Range
      7841635..7850489
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)