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    LOC797085 zinc metalloproteinase nas-4-like [ Danio rerio (zebrafish) ]

    Gene ID: 797085, updated on 17-Sep-2024

    Summary

    Gene symbol
    LOC797085
    Gene description
    zinc metalloproteinase nas-4-like
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Orthologs
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    Genomic context

    See LOC797085 in Genome Data Viewer
    Location:
    chromosome: 10
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCz11 (GCF_000002035.6) 10 NC_007121.7 (42885300..42898850, complement)
    105 previous assembly GRCz10 (GCF_000002035.5) 10 NC_007121.6 (43056940..43070503, complement)

    Chromosome 10 - NC_007121.7Genomic Context describing neighboring genes Neighboring gene WD repeat domain 45 Neighboring gene alpha-2B adrenergic receptor Neighboring gene zinc finger, CCHC domain containing 9 Neighboring gene acyl-CoA thioesterase 12

    Genomic regions, transcripts, and products

    Expression

    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    General protein information

    Preferred Names
    astacin-like metalloendopeptidase
    NP_001373298.1
    NP_001373299.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001386369.1NP_001373298.1  astacin-like metalloendopeptidase isoform 1 precursor

      Status: VALIDATED

      Source sequence(s)
      CU326366, FP236542
      UniProtKB/TrEMBL
      A0A8M6Z8J3
      Conserved Domains (1) summary
      cd04280
      Location:111281
      ZnMc_astacin_like; Zinc-dependent metalloprotease, astacin_like subfamily or peptidase family M12A, a group of zinc-dependent proteolytic enzymes with a HExxH zinc-binding site/active site. Members of this family may have an amino terminal propeptide, which is cleaved to ...
    2. NM_001386370.1NP_001373299.1  astacin-like metalloendopeptidase isoform 2 precursor

      Status: VALIDATED

      Source sequence(s)
      CU326366, FP236542
      Conserved Domains (1) summary
      cd04280
      Location:110280
      ZnMc_astacin_like; Zinc-dependent metalloprotease, astacin_like subfamily or peptidase family M12A, a group of zinc-dependent proteolytic enzymes with a HExxH zinc-binding site/active site. Members of this family may have an amino terminal propeptide, which is cleaved to ...

    RNA

    1. NR_170092.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      CU326366, FP236542
    2. NR_170093.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      CU326366, FP236542

    RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007121.7 Reference GRCz11 Primary Assembly

      Range
      42885300..42898850 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)