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    dnajc24 DnaJ (Hsp40) homolog, subfamily C, member 24 [ Danio rerio (zebrafish) ]

    Gene ID: 393424, updated on 4-Jan-2025

    Summary

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    Official Symbol
    dnajc24provided by ZNC
    Official Full Name
    DnaJ (Hsp40) homolog, subfamily C, member 24provided by ZNC
    Primary source
    ZFIN:ZDB-GENE-040426-1153
    See related
    Ensembl:ENSDARG00000023927 AllianceGenome:ZFIN:ZDB-GENE-040426-1153
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Also known as
    dph4; zgc:63541
    Summary
    Predicted to enable ATPase activator activity. Orthologous to human DNAJC24 (DnaJ heat shock protein family (Hsp40) member C24). [provided by Alliance of Genome Resources, Jan 2025]
    Orthologs
    human mouse all
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    Genomic context

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    See dnajc24 in Genome Data Viewer
    Location:
    chromosome: 25
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCz11 (GCF_000002035.6) 25 NC_007136.7 (14870054..14899109)
    105 previous assembly GRCz10 (GCF_000002035.5) 25 NC_007136.6 (14773654..14802709)

    Chromosome 25 - NC_007136.7Genomic Context describing neighboring genes Neighboring gene metallophosphoesterase domain containing 2b Neighboring gene uncharacterized LOC137489337 Neighboring gene uncharacterized LOC101882606 Neighboring gene paired box 6a

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    Bibliography

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    Related articles in PubMed

    1. Evolution of the vertebrate Pax4/6 class of genes with focus on its novel member, the Pax10 gene. Feiner N, et al. Genome Biol Evol, 2014 Jun 19. PMID 24951566, Free PMC Article
    2. Systematic human/zebrafish comparative identification of cis-regulatory activity around vertebrate developmental transcription factor genes. Navratilova P, et al. Dev Biol, 2009 Mar 15. PMID 19073165
    3. RFX transcription factors are essential for hearing in mice. Elkon R, et al. Nat Commun, 2015 Oct 15. PMID 26469318, Free PMC Article
    4. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article
    5. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Clone Names

    • MGC63541, MGC174817

    Gene Ontology Provided by ZFIN

    Function Evidence Code Pubs
    enables ATPase activator activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
    		  

    General protein information

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    Preferred Names
    dnaJ homolog subfamily C member 24
    Names
    DPH4 homolog (JJJ3, S. cerevisiae)

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_200452.1 → NP_956746.1  dnaJ homolog subfamily C member 24

      See identical proteins and their annotated locations for NP_956746.1

      Status: PROVISIONAL

      Source sequence(s)
      BC055135
      UniProtKB/TrEMBL
      A0A0R4IBF5, A0A8M1PF79, Q7SY41
      Related
      ENSDARP00000037632.6, ENSDART00000035714.7
      Conserved Domains (2) summary
      pfam00226
      Location:10 → 78
      DnaJ; DnaJ domain
      pfam05207
      Location:94 → 146
      zf-CSL; CSL zinc finger

    RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007136.7 Reference GRCz11 Primary Assembly

      Range
      14870054..14899109
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Reference GRCz11 ALT_DRER_TU_1

    Genomic

    1. NW_018395193.1 Reference GRCz11 ALT_DRER_TU_1

      Range
      138672..148873
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. XR_002457767.2 RNA Sequence

    Suppressed Reference Sequence(s)

    The following Reference Sequences have been suppressed. Explain

    1. NM_001111213.1: Suppressed sequence

      Description
      NM_001111213.1: This RefSeq was temporarily suppressed because currently there is not sufficient data to support this transcript.
    Nucleotide Protein Strain
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.