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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001135726.3 → NP_001129198.1 homeobox-containing protein 1 isoform 1
See identical proteins and their annotated locations for NP_001129198.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (2) differs in the 5' UTR compared to variant 1. Variants 1, 2, and 3 all encode the same isoform (1).
- Source sequence(s)
-
AC108449, AK290683, BQ019252
- Consensus CDS
-
CCDS6071.1
- UniProtKB/Swiss-Prot
- A4K385, A8K3R8, B4DHY5, D3DSU0, Q3Y6P1, Q6NT76, Q96GS5, Q9H701
- UniProtKB/TrEMBL
-
E5RGZ2
- Related
- ENSP00000287701.10, ENST00000287701.15
- Conserved Domains (2) summary
-
- cd00086
Location:268 → 340
- homeodomain; Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic developmental processes; may bind to DNA as monomers or as homo- and/or heterodimers, in a sequence-specific manner.
- pfam04814
Location:25 → 227
- HNF-1_N; Hepatocyte nuclear factor 1 (HNF-1), N-terminus
-
NM_001324382.2 → NP_001311311.1 homeobox-containing protein 1 isoform 1
Status: VALIDATED
- Description
- Transcript Variant: This variant (3) differs in the 5' UTR compared to variant 1. Variants 1, 2, and 3 all encode the same isoform (1).
- Source sequence(s)
-
AC040975, AC108449, AK290683, BQ019252, DC358620, DC395744
- Consensus CDS
-
CCDS6071.1
- UniProtKB/Swiss-Prot
- A4K385, A8K3R8, B4DHY5, D3DSU0, Q3Y6P1, Q6NT76, Q96GS5, Q9H701
- UniProtKB/TrEMBL
-
E5RGZ2
- Conserved Domains (2) summary
-
- cd00086
Location:268 → 340
- homeodomain; Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic developmental processes; may bind to DNA as monomers or as homo- and/or heterodimers, in a sequence-specific manner.
- pfam04814
Location:25 → 227
- HNF-1_N; Hepatocyte nuclear factor 1 (HNF-1), N-terminus
-
NM_001324383.2 → NP_001311312.1 homeobox-containing protein 1 isoform 2
Status: VALIDATED
- Source sequence(s)
-
AC108449, AK290683, AK295320, BC069242, BQ019252
- UniProtKB/TrEMBL
-
E5RGZ2
- Conserved Domains (2) summary
-
- cd00086
Location:268 → 340
- homeodomain; Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic developmental processes; may bind to DNA as monomers or as homo- and/or heterodimers, in a sequence-specific manner.
- pfam04814
Location:25 → 227
- HNF-1_N; Hepatocyte nuclear factor 1 (HNF-1), N-terminus
-
NM_001324384.1 → NP_001311313.1 homeobox-containing protein 1 isoform 2
Status: VALIDATED
- Source sequence(s)
-
AC108449, AK290683, AK295320, BC069242, BQ019252
- UniProtKB/TrEMBL
-
E5RGZ2
- Conserved Domains (2) summary
-
- cd00086
Location:268 → 340
- homeodomain; Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic developmental processes; may bind to DNA as monomers or as homo- and/or heterodimers, in a sequence-specific manner.
- pfam04814
Location:25 → 227
- HNF-1_N; Hepatocyte nuclear factor 1 (HNF-1), N-terminus
-
NM_001324385.2 → NP_001311314.1 homeobox-containing protein 1 isoform 3
Status: VALIDATED
- Source sequence(s)
-
AC040975, AC091558, AC108449, AK290683, BQ019252
- UniProtKB/TrEMBL
-
E5RGZ2
- Conserved Domains (2) summary
-
- cd00086
Location:268 → 340
- homeodomain; Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic developmental processes; may bind to DNA as monomers or as homo- and/or heterodimers, in a sequence-specific manner.
- pfam04814
Location:25 → 227
- HNF-1_N; Hepatocyte nuclear factor 1 (HNF-1), N-terminus
-
NM_001324386.2 → NP_001311315.1 homeobox-containing protein 1 isoform 4
Status: VALIDATED
- Source sequence(s)
-
AC108449, AK290683, BQ019252, DQ153248
- UniProtKB/TrEMBL
-
E5RGZ2
- Related
- ENSP00000430059.1, ENST00000519047.5
- Conserved Domains (2) summary
-
- cd00086
Location:268 → 340
- homeodomain; Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic developmental processes; may bind to DNA as monomers or as homo- and/or heterodimers, in a sequence-specific manner.
- pfam04814
Location:25 → 227
- HNF-1_N; Hepatocyte nuclear factor 1 (HNF-1), N-terminus
-
NM_001324387.2 → NP_001311316.1 homeobox-containing protein 1 isoform 5
Status: VALIDATED
- Source sequence(s)
-
AC108449, AK290683, BQ019252, DQ153248
- UniProtKB/TrEMBL
-
E5RGZ2
- Conserved Domains (2) summary
-
- cd00086
Location:268 → 340
- homeodomain; Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic developmental processes; may bind to DNA as monomers or as homo- and/or heterodimers, in a sequence-specific manner.
- pfam04814
Location:25 → 227
- HNF-1_N; Hepatocyte nuclear factor 1 (HNF-1), N-terminus
-
NM_001324388.2 → NP_001311317.1 homeobox-containing protein 1 isoform 5
Status: VALIDATED
- Source sequence(s)
-
AC040975, AC108449, AK290683, BQ019252, DC358620, DC395744, DQ153248
- UniProtKB/TrEMBL
-
E5RGZ2
- Conserved Domains (2) summary
-
- cd00086
Location:268 → 340
- homeodomain; Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic developmental processes; may bind to DNA as monomers or as homo- and/or heterodimers, in a sequence-specific manner.
- pfam04814
Location:25 → 227
- HNF-1_N; Hepatocyte nuclear factor 1 (HNF-1), N-terminus
-
NM_001324389.2 → NP_001311318.1 homeobox-containing protein 1 isoform 6
Status: VALIDATED
- Source sequence(s)
-
AC040975, AC091558, AC108449, AK290683, BQ019252
- UniProtKB/TrEMBL
-
H0YLF2
- Conserved Domains (2) summary
-
- cd00086
Location:268 → 340
- homeodomain; Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic developmental processes; may bind to DNA as monomers or as homo- and/or heterodimers, in a sequence-specific manner.
- pfam04814
Location:25 → 227
- HNF-1_N; Hepatocyte nuclear factor 1 (HNF-1), N-terminus
-
NM_001324390.1 → NP_001311319.1 homeobox-containing protein 1 isoform 6
Status: VALIDATED
- Source sequence(s)
-
AC091558, AC108449, BC069242, BQ019252
- UniProtKB/TrEMBL
-
H0YLF2
- Conserved Domains (2) summary
-
- cd00086
Location:268 → 340
- homeodomain; Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic developmental processes; may bind to DNA as monomers or as homo- and/or heterodimers, in a sequence-specific manner.
- pfam04814
Location:25 → 227
- HNF-1_N; Hepatocyte nuclear factor 1 (HNF-1), N-terminus
-
NM_001324391.2 → NP_001311320.1 homeobox-containing protein 1 isoform 7
Status: VALIDATED
- Source sequence(s)
-
AC108449, AK290683, BC009259, BQ019252
- Consensus CDS
-
CCDS83274.1
- UniProtKB/TrEMBL
-
E5RGZ2
- Related
- ENSP00000453211.1, ENST00000558662.5
- Conserved Domains (2) summary
-
- cd00086
Location:268 → 340
- homeodomain; Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic developmental processes; may bind to DNA as monomers or as homo- and/or heterodimers, in a sequence-specific manner.
- pfam04814
Location:25 → 227
- HNF-1_N; Hepatocyte nuclear factor 1 (HNF-1), N-terminus
-
NM_001324392.1 → NP_001311321.1 homeobox-containing protein 1 isoform 7
Status: VALIDATED
- Source sequence(s)
-
AC040975, AC091558, AC108449, BC069242, BQ019252
- Consensus CDS
-
CCDS83274.1
- UniProtKB/TrEMBL
-
E5RGZ2
- Conserved Domains (2) summary
-
- cd00086
Location:268 → 340
- homeodomain; Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic developmental processes; may bind to DNA as monomers or as homo- and/or heterodimers, in a sequence-specific manner.
- pfam04814
Location:25 → 227
- HNF-1_N; Hepatocyte nuclear factor 1 (HNF-1), N-terminus
-
NM_001324393.2 → NP_001311322.1 homeobox-containing protein 1 isoform 8
Status: VALIDATED
- Source sequence(s)
-
AC108449, AK290683, BC009259, BQ019252, DC341559, DQ153248
- UniProtKB/TrEMBL
-
H0YLF2
- Conserved Domains (2) summary
-
- cd00086
Location:268 → 340
- homeodomain; Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic developmental processes; may bind to DNA as monomers or as homo- and/or heterodimers, in a sequence-specific manner.
- pfam04814
Location:25 → 227
- HNF-1_N; Hepatocyte nuclear factor 1 (HNF-1), N-terminus
-
NM_001324394.2 → NP_001311323.1 homeobox-containing protein 1 isoform 8
Status: VALIDATED
- Source sequence(s)
-
AC108449, AK290683, BC009259, BQ019252, DC341559, DQ153248
- UniProtKB/TrEMBL
-
H0YLF2
- Conserved Domains (2) summary
-
- cd00086
Location:268 → 340
- homeodomain; Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic developmental processes; may bind to DNA as monomers or as homo- and/or heterodimers, in a sequence-specific manner.
- pfam04814
Location:25 → 227
- HNF-1_N; Hepatocyte nuclear factor 1 (HNF-1), N-terminus
-
NM_001324395.2 → NP_001311324.1 homeobox-containing protein 1 isoform 9
Status: VALIDATED
- Source sequence(s)
-
AC108449, AK290683, BC009259, BQ019252
- UniProtKB/TrEMBL
-
E5RGZ2
- Conserved Domains (2) summary
-
- cd00086
Location:268 → 340
- homeodomain; Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic developmental processes; may bind to DNA as monomers or as homo- and/or heterodimers, in a sequence-specific manner.
- pfam04814
Location:25 → 227
- HNF-1_N; Hepatocyte nuclear factor 1 (HNF-1), N-terminus
-
NM_001330498.2 → NP_001317427.1 homeobox-containing protein 1 isoform 10
Status: VALIDATED
- Source sequence(s)
-
AC108449, BF369137, BQ019252, BX353564, HY077398
- Consensus CDS
-
CCDS83273.1
- UniProtKB/TrEMBL
-
E5RGZ2
- Related
- ENSP00000430110.1, ENST00000524238.3
- Conserved Domains (2) summary
-
- cd00086
Location:268 → 340
- homeodomain; Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic developmental processes; may bind to DNA as monomers or as homo- and/or heterodimers, in a sequence-specific manner.
- pfam04814
Location:25 → 227
- HNF-1_N; Hepatocyte nuclear factor 1 (HNF-1), N-terminus
-
NM_024567.4 → NP_078843.2 homeobox-containing protein 1 isoform 1
See identical proteins and their annotated locations for NP_078843.2
Status: VALIDATED
- Description
- Transcript Variant: This variant (1) encodes isoform 1. Variants 1, 2, and 3 all encode the same isoform (1).
- Source sequence(s)
-
AC108449, BC069242, BQ019252
- Consensus CDS
-
CCDS6071.1
- UniProtKB/Swiss-Prot
- A4K385, A8K3R8, B4DHY5, D3DSU0, Q3Y6P1, Q6NT76, Q96GS5, Q9H701
- UniProtKB/TrEMBL
-
E5RGZ2
- Related
- ENSP00000380516.3, ENST00000397358.7
- Conserved Domains (2) summary
-
- cd00086
Location:268 → 340
- homeodomain; Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic developmental processes; may bind to DNA as monomers or as homo- and/or heterodimers, in a sequence-specific manner.
- pfam04814
Location:25 → 227
- HNF-1_N; Hepatocyte nuclear factor 1 (HNF-1), N-terminus
RNA
-
NR_136757.2 RNA Sequence
Status: VALIDATED
- Source sequence(s)
-
AC108449, AK290683, BC009259, BQ019252
-
NR_136758.2 RNA Sequence
Status: VALIDATED
- Source sequence(s)
-
AA400589, AC108449, AK290683, BQ019252, DQ153248
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000008.11 Reference GRCh38.p14 Primary Assembly
- Range
-
28890116..29053270
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_047422223.1 → XP_047278179.1 homeobox-containing protein 1 isoform X4
- UniProtKB/Swiss-Prot
- A4K385, A8K3R8, B4DHY5, D3DSU0, Q3Y6P1, Q6NT76, Q96GS5, Q9H701
- UniProtKB/TrEMBL
-
E5RGZ2
-
XM_017013823.3 → XP_016869312.1 homeobox-containing protein 1 isoform X1
- UniProtKB/TrEMBL
-
E5RGZ2
- Conserved Domains (2) summary
-
- cd00086
Location:268 → 340
- homeodomain; Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic developmental processes; may bind to DNA as monomers or as homo- and/or heterodimers, in a sequence-specific manner.
- pfam04814
Location:25 → 227
- HNF-1_N; Hepatocyte nuclear factor 1 (HNF-1), N-terminus
-
XM_047422219.1 → XP_047278175.1 homeobox-containing protein 1 isoform X1
- UniProtKB/TrEMBL
-
E5RGZ2
-
XM_047422224.1 → XP_047278180.1 homeobox-containing protein 1 isoform X4
- UniProtKB/Swiss-Prot
- A4K385, A8K3R8, B4DHY5, D3DSU0, Q3Y6P1, Q6NT76, Q96GS5, Q9H701
- UniProtKB/TrEMBL
-
E5RGZ2
-
XM_047422227.1 → XP_047278183.1 homeobox-containing protein 1 isoform X5
- UniProtKB/TrEMBL
-
E5RGZ2
-
XM_006716398.3 → XP_006716461.1 homeobox-containing protein 1 isoform X6
- UniProtKB/TrEMBL
-
H0YLF2
- Related
- ENSP00000453185.1, ENST00000560599.5
- Conserved Domains (2) summary
-
- cd00086
Location:268 → 305
- homeodomain; Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic developmental processes; may bind to DNA as monomers or as homo- and/or heterodimers, in a sequence-specific manner.
- pfam04814
Location:25 → 226
- HNF-1_N; Hepatocyte nuclear factor 1 (HNF-1), N terminus
-
XM_047422229.1 → XP_047278185.1 homeobox-containing protein 1 isoform X7
- UniProtKB/TrEMBL
-
H0YLF2
-
XM_017013825.2 → XP_016869314.1 homeobox-containing protein 1 isoform X7
- UniProtKB/TrEMBL
-
H0YLF2
- Related
- ENSP00000430238.1, ENST00000521516.5
- Conserved Domains (1) summary
-
- pfam04814
Location:25 → 226
- HNF-1_N; Hepatocyte nuclear factor 1 (HNF-1), N terminus
-
XM_011544642.3 → XP_011542944.1 homeobox-containing protein 1 isoform X8
- Conserved Domains (1) summary
-
- pfam04814
Location:25 → 226
- HNF-1_N; Hepatocyte nuclear factor 1 (HNF-1), N terminus
-
XM_047422220.1 → XP_047278176.1 homeobox-containing protein 1 isoform X2
- UniProtKB/TrEMBL
-
E5RGZ2
-
XM_047422222.1 → XP_047278178.1 homeobox-containing protein 1 isoform X4
- UniProtKB/Swiss-Prot
- A4K385, A8K3R8, B4DHY5, D3DSU0, Q3Y6P1, Q6NT76, Q96GS5, Q9H701
- UniProtKB/TrEMBL
-
E5RGZ2
-
XM_047422228.1 → XP_047278184.1 homeobox-containing protein 1 isoform X5
- UniProtKB/TrEMBL
-
E5RGZ2
-
XM_047422221.1 → XP_047278177.1 homeobox-containing protein 1 isoform X3
- UniProtKB/TrEMBL
-
E5RGZ2
-
XM_047422218.1 → XP_047278174.1 homeobox-containing protein 1 isoform X1
- UniProtKB/TrEMBL
-
E5RGZ2
-
XM_047422226.1 → XP_047278182.1 homeobox-containing protein 1 isoform X5
- UniProtKB/TrEMBL
-
E5RGZ2
- Related
- ENSP00000475196.1, ENST00000355231.9
RNA
-
XR_001745595.2 RNA Sequence
Alternate T2T-CHM13v2.0
Genomic
-
NC_060932.1 Alternate T2T-CHM13v2.0
- Range
-
29168300..29331436
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_054361209.1 → XP_054217184.1 homeobox-containing protein 1 isoform X4
- UniProtKB/Swiss-Prot
- A4K385, A8K3R8, B4DHY5, D3DSU0, Q3Y6P1, Q6NT76, Q96GS5, Q9H701
- UniProtKB/TrEMBL
-
E5RGZ2
-
XM_054361203.1 → XP_054217178.1 homeobox-containing protein 1 isoform X1
- UniProtKB/TrEMBL
-
E5RGZ2
-
XM_054361205.1 → XP_054217180.1 homeobox-containing protein 1 isoform X1
- UniProtKB/TrEMBL
-
E5RGZ2
-
XM_054361210.1 → XP_054217185.1 homeobox-containing protein 1 isoform X4
- UniProtKB/Swiss-Prot
- A4K385, A8K3R8, B4DHY5, D3DSU0, Q3Y6P1, Q6NT76, Q96GS5, Q9H701
- UniProtKB/TrEMBL
-
E5RGZ2
-
XM_054361212.1 → XP_054217187.1 homeobox-containing protein 1 isoform X5
- UniProtKB/TrEMBL
-
E5RGZ2
-
XM_054361214.1 → XP_054217189.1 homeobox-containing protein 1 isoform X6
- UniProtKB/TrEMBL
-
H0YLF2
-
XM_054361216.1 → XP_054217191.1 homeobox-containing protein 1 isoform X7
- UniProtKB/TrEMBL
-
H0YLF2
-
XM_054361215.1 → XP_054217190.1 homeobox-containing protein 1 isoform X7
- UniProtKB/TrEMBL
-
H0YLF2
-
XM_054361217.1 → XP_054217192.1 homeobox-containing protein 1 isoform X8
-
XM_054361206.1 → XP_054217181.1 homeobox-containing protein 1 isoform X2
- UniProtKB/TrEMBL
-
E5RGZ2
-
XM_054361208.1 → XP_054217183.1 homeobox-containing protein 1 isoform X4
- UniProtKB/Swiss-Prot
- A4K385, A8K3R8, B4DHY5, D3DSU0, Q3Y6P1, Q6NT76, Q96GS5, Q9H701
- UniProtKB/TrEMBL
-
E5RGZ2
-
XM_054361213.1 → XP_054217188.1 homeobox-containing protein 1 isoform X5
- UniProtKB/TrEMBL
-
E5RGZ2
-
XM_054361207.1 → XP_054217182.1 homeobox-containing protein 1 isoform X3
- UniProtKB/TrEMBL
-
E5RGZ2
-
XM_054361204.1 → XP_054217179.1 homeobox-containing protein 1 isoform X1
- UniProtKB/TrEMBL
-
E5RGZ2
-
XM_054361211.1 → XP_054217186.1 homeobox-containing protein 1 isoform X5
- UniProtKB/TrEMBL
-
E5RGZ2
RNA
-
XR_008487881.1 RNA Sequence