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    Vmn1r230 vomeronasal 1 receptor 230 [ Mus musculus (house mouse) ]

    Gene ID: 171231, updated on 27-Nov-2024

    Summary

    Official Symbol
    Vmn1r230provided by MGI
    Official Full Name
    vomeronasal 1 receptor 230provided by MGI
    Primary source
    MGI:MGI:2159629
    See related
    Ensembl:ENSMUSG00000045417 AllianceGenome:MGI:2159629
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    V1re8
    Summary
    Predicted to enable pheromone binding activity and pheromone receptor activity. Predicted to act upstream of or within response to pheromone. Predicted to be located in plasma membrane. [provided by Alliance of Genome Resources, Nov 2024]
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    Genomic context

    See Vmn1r230 in Genome Data Viewer
    Location:
    17 A3.2; 17 11.4 cM
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 17 NC_000083.7 (21066813..21067763)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 17 NC_000083.6 (20846551..20847501)

    Chromosome 17 - NC_000083.7Genomic Context describing neighboring genes Neighboring gene vomeronasal 1 receptor 228 Neighboring gene STARR-seq mESC enhancer starr_42001 Neighboring gene vomeronasal 1 receptor 229 Neighboring gene vomeronasal 1 receptor 231 Neighboring gene vomeronasal 1 receptor 232

    Genomic regions, transcripts, and products

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Endonuclease-mediated (2) 

    General gene information

    Markers

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables pheromone binding ISS
    Inferred from Sequence or Structural Similarity
    more info
    PubMed 
    enables pheromone receptor activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    PubMed 
    Process Evidence Code Pubs
    acts_upstream_of_or_within response to pheromone ISS
    Inferred from Sequence or Structural Similarity
    more info
    PubMed 
    Component Evidence Code Pubs
    located_in plasma membrane ISS
    Inferred from Sequence or Structural Similarity
    more info
    PubMed 

    General protein information

    Preferred Names
    vomeronasal 1 receptor 230
    Names
    vomernasal 1 receptor Vmn1r230
    vomeronasal 1 receptor, E8
    vomeronasal type 1 receptor E8

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_134197.1NP_598958.1  vomeronasal 1 receptor 230

      See identical proteins and their annotated locations for NP_598958.1

      Status: PROVISIONAL

      Source sequence(s)
      AY065508
      Consensus CDS
      CCDS28429.1
      UniProtKB/TrEMBL
      F6MBL5, F6MBL7, F6MBM2, F6MBM7, F6MBN1, Q8R2A2
      Related
      ENSMUSP00000061330.2, ENSMUST00000053974.2
      Conserved Domains (2) summary
      pfam03402
      Location:55270
      V1R; Vomeronasal organ pheromone receptor family, V1R
      pfam00001
      Location:48296
      7tm_1; 7 transmembrane receptor (rhodopsin family)

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000083.7 Reference GRCm39 C57BL/6J

      Range
      21066813..21067763
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)