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    Actin-like ATPase superfamily protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 839934, updated on 18-Sep-2024

    Summary

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    Official Full Name
    Actin-like ATPase superfamily protein
    Primary source
    TAIR:AT1G30540
    Locus tag
    AT1G30540
    See related
    Araport:AT1G30540
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F26G16.16; F26G16_16
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    Genomic context

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    Location:
    chromosome: 1
    Exon count:
    7
    Sequence:
    Chromosome: 1; NC_003070.9 (10816616..10819419, complement)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene UDP-glucosyl transferase 78D1 Neighboring gene S-adenosyl-L-methionine-dependent methyltransferase superfamily protein Neighboring gene S-adenosyl-L-methionine-dependent methyltransferase superfamily protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Identification of an N-acetylglucosamine kinase essential for UDP-N-acetylglucosamine salvage synthesis in Arabidopsis. Furo K, et al. FEBS Lett, 2015 Oct 24. PMID 26408204
    2. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_001332906.1
    NM_001332907.1
    NM_001332908.1
    NM_102791.5

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables N-acetylglucosamine kinase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in cytoplasm ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    Actin-like ATPase superfamily protein
    NP_564358.1
    • Actin-like ATPase superfamily protein; CONTAINS InterPro DOMAIN/s: ATPase, BadF/BadG/BcrA/BcrD type (InterPro:IPR002731); Has 1833 Blast hits to 1833 proteins in 714 species: Archae - 64; Bacteria - 1392; Metazoa - 117; Fungi - 35; Plants - 122; Viruses - 0; Other Eukaryotes - 103 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      10816616..10819419 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_102791.5 → NP_564358.1  Actin-like ATPase superfamily protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_564358.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A654EE50, Q8LGE0, Q9S9P5
      Conserved Domains (1) summary
      pfam01869
      Location:33 → 345
      BcrAD_BadFG; BadF/BadG/BcrA/BcrD ATPase family

    2. NM_001332906.1 → NP_001321926.1  Actin-like ATPase superfamily protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178WHL8, A0A384L528, C0Z394
      Conserved Domains (1) summary
      cl17037
      Location:6 → 274
      NBD_sugar-kinase_HSP70_actin; Nucleotide-Binding Domain of the sugar kinase/HSP70/actin superfamily

    3. NM_001332907.1 → NP_001321927.1  Actin-like ATPase superfamily protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178WHL8, A0A384L528, C0Z394
      Conserved Domains (1) summary
      cl17037
      Location:6 → 274
      NBD_sugar-kinase_HSP70_actin; Nucleotide-Binding Domain of the sugar kinase/HSP70/actin superfamily

    4. NM_001332908.1 → NP_001321925.1  Actin-like ATPase superfamily protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8ASE9, A0A5S9WEH2
    Nucleotide Protein
    Heading Accession and Version

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