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    Vmn1r227 vomeronasal 1 receptor 227 [ Mus musculus (house mouse) ]

    Gene ID: 171229, updated on 9-Dec-2024

    Summary

    Official Symbol
    Vmn1r227provided by MGI
    Official Full Name
    vomeronasal 1 receptor 227provided by MGI
    Primary source
    MGI:MGI:2159627
    See related
    Ensembl:ENSMUSG00000067951 AllianceGenome:MGI:2159627
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    V1re6
    Summary
    Predicted to enable pheromone binding activity and pheromone receptor activity. Predicted to act upstream of or within response to pheromone. Predicted to be located in plasma membrane. [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

    See Vmn1r227 in Genome Data Viewer
    Location:
    17 A3.2; 17 11.4 cM
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 17 NC_000083.7 (20955468..20956388)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 17 NC_000083.6 (20735206..20736126)

    Chromosome 17 - NC_000083.7Genomic Context describing neighboring genes Neighboring gene predicted gene, 52311 Neighboring gene STARR-seq mESC enhancer starr_41999 Neighboring gene vomeronasal 1 receptor 226 Neighboring gene STARR-seq mESC enhancer starr_42000 Neighboring gene vomeronasal 1 receptor 228 Neighboring gene STARR-seq mESC enhancer starr_42001 Neighboring gene vomeronasal 1 receptor 229

    Genomic regions, transcripts, and products

    General gene information

    Markers

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables pheromone binding ISS
    Inferred from Sequence or Structural Similarity
    more info
    PubMed 
    enables pheromone receptor activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    PubMed 
    Process Evidence Code Pubs
    acts_upstream_of_or_within response to pheromone ISS
    Inferred from Sequence or Structural Similarity
    more info
    PubMed 
    Component Evidence Code Pubs
    located_in plasma membrane ISS
    Inferred from Sequence or Structural Similarity
    more info
    PubMed 

    General protein information

    Preferred Names
    vomeronasal 1 receptor, E6
    Names
    vomernasal 1 receptor Vmn1r227

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_134195.3NP_598956.3  vomeronasal 1 receptor, E6

      Status: VALIDATED

      Source sequence(s)
      AC107868
      UniProtKB/TrEMBL
      A0A3B2W3R4
      Related
      ENSMUSP00000156485.2, ENSMUST00000179914.3
      Conserved Domains (2) summary
      cd13949
      Location:832
      7tm_V1R_pheromone; TM helix 1 [structural motif]
      cl28897
      Location:8299
      7tm_GPCRs; seven-transmembrane G protein-coupled receptor superfamily

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000083.7 Reference GRCm39 C57BL/6J

      Range
      20955468..20956388
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)