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    hypothetical protein (DUF295) [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 839896, updated on 18-Sep-2024

    Summary

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    Official Full Name
    hypothetical protein (DUF295)
    Primary source
    TAIR:AT1G30160
    Locus tag
    AT1G30160
    See related
    Araport:AT1G30160
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    T2H7.4; T2H7_4
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    Genomic context

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    Location:
    chromosome: 1
    Exon count:
    3
    Sequence:
    Chromosome: 1; NC_003070.9 (10606159..10607944)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene Myb/SANT-like DNA-binding domain protein Neighboring gene pseudo Neighboring gene hypothetical protein (DUF295) Neighboring gene pseudo Neighboring gene cotton fiber protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_001036036.2
    NM_102756.5

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
    		  
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    hypothetical protein (DUF295)
    NP_001031113.1
    • Protein of unknown function (DUF295); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF295 (InterPro:IPR005174); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF295) (TAIR:AT1G05540.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
    NP_174308.1
    • Protein of unknown function (DUF295); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF295 (InterPro:IPR005174); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF295) (TAIR:AT1G05540.1); Has 206 Blast hits to 198 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 206; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      10606159..10607944
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_102756.5 → NP_174308.1  hypothetical protein (DUF295) [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_174308.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178WAK5, A0A7G2DU48, Q9C6Z7
      Conserved Domains (1) summary
      pfam03478
      Location:236 → 269
      DUF295; Protein of unknown function (DUF295)

    2. NM_001036036.2 → NP_001031113.1  hypothetical protein (DUF295) [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001031113.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A654EJ84, Q6DBP6
    Nucleotide Protein
    Heading Accession and Version

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