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    LOW protein: ankyrin repeat protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 824574, updated on 18-Sep-2024

    Summary

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    Official Full Name
    LOW protein: ankyrin repeat protein
    Primary source
    TAIR:AT3G54070
    Locus tag
    AT3G54070
    See related
    Araport:AT3G54070
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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    Genomic context

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    Location:
    chromosome: 3
    Exon count:
    3
    Sequence:
    Chromosome: 3; NC_003074.8 (20022642..20023603, complement)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene high cyclic electron flow 1 Neighboring gene myosin-M heavy protein Neighboring gene LOW protein: ankyrin repeat protein Neighboring gene Concanavalin A-like lectin family protein Neighboring gene ncRNA Neighboring gene Yos1-like protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

    GeneRIFs: Gene References Into Functions

    General gene information

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    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in cytoplasm ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    LOW protein: ankyrin repeat protein
    NP_190975.2
    • Ankyrin repeat family protein; CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: Ankyrin repeat family protein (TAIR:AT5G35810.1); Has 10613 Blast hits to 6237 proteins in 350 species: Archae - 27; Bacteria - 619; Metazoa - 5584; Fungi - 682; Plants - 1506; Viruses - 31; Other Eukaryotes - 2164 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      20022642..20023603 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_115267.2 → NP_190975.2  LOW protein: ankyrin repeat protein, partial [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A654FFN4, F4JBR5
    Nucleotide Protein
    Heading Accession and Version

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