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    DnaJ heat shock amino-terminal domain protein (DUF1977) [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 834965, updated on 18-Sep-2024

    Summary

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    Official Full Name
    DnaJ heat shock amino-terminal domain protein (DUF1977)
    Primary source
    TAIR:AT5G49060
    Locus tag
    AT5G49060
    See related
    Araport:AT5G49060
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    K20J1.3; K20J1_3
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    Genomic context

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    Location:
    chromosome: 5
    Exon count:
    3
    Sequence:
    Chromosome: 5; NC_003076.8 (19886308..19888571)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene universal stress A-like protein Neighboring gene ncRNA Neighboring gene 3-ketoacyl-CoA synthase 21 Neighboring gene pseudo

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Proteomic profiling of tandem affinity purified 14-3-3 protein complexes in Arabidopsis thaliana. Chang IF, et al. Proteomics, 2009 Jun. PMID 19452453, Free PMC Article
    2. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    NM_001344813.1
    NM_124283.5

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    DnaJ heat shock amino-terminal domain protein (DUF1977)
    NP_199717.2
    • FUNCTIONS IN: protein binding; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Protein of unknown function DUF1977, DnaJ-like (InterPro:IPR015399), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ (InterPro:IPR003095); BEST Arabidopsis thaliana protein match is: Heat shock protein DnaJ, N-terminal with domain of unknown function (DUF1977) (TAIR:AT3G57340.2); Has 23804 Blast hits to 23788 proteins in 3287 species: Archae - 182; Bacteria - 9342; Metazoa - 4208; Fungi - 2292; Plants - 2452; Viruses - 18; Other Eukaryotes - 5310 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      19886308..19888571
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_124283.5 → NP_199717.2  DnaJ heat shock amino-terminal domain protein (DUF1977) [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_199717.2

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q67XE5, Q9FH28
      UniProtKB/TrEMBL
      A0A178UDZ3
      Conserved Domains (2) summary
      pfam00226
      Location:99 → 160
      DnaJ; DnaJ domain
      pfam09320
      Location:258 → 344
      DUF1977; Domain of unknown function (DUF1977)

    2. NM_001344813.1 → NP_001331231.1  DnaJ heat shock amino-terminal domain protein (DUF1977) [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q67XE5, Q9FH28
      UniProtKB/TrEMBL
      A0A178UDZ3
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9FH28.2

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