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    MYB86 myb domain protein 86 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 832723, updated on 18-Sep-2024

    Summary

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    Official Symbol
    MYB86
    Official Full Name
    myb domain protein 86
    Primary source
    TAIR:AT5G26660
    Locus tag
    AT5G26660
    See related
    Araport:AT5G26660
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    ATMYB4; ATMYB4-old; ATMYB86; myb domain protein 4; myb domain protein 86
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    Genomic context

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    See MYB86 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    3
    Sequence:
    Chromosome: 5; NC_003076.8 (9331565..9333284, complement)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene Heavy metal transport/detoxification superfamily protein Neighboring gene 5'-3' exonuclease family protein Neighboring gene Pectinacetylesterase family protein Neighboring gene AGAMOUS-like 36 Neighboring gene ncRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. AtMYB4: a transcription factor general in the battle against UV. Hemm MR, et al. Trends Plant Sci, 2001 Apr. PMID 11286899
    2. Transcriptional Regulation of Arabidopsis Polycomb Repressive Complex 2 Coordinates Cell-Type Proliferation and Differentiation. de Lucas M, et al. Plant Cell, 2016 Oct. PMID 27650334, Free PMC Article
    3. Regulation of leaf maturation by chromatin-mediated modulation of cytokinin responses. Efroni I, et al. Dev Cell, 2013 Feb 25. PMID 23449474, Free PMC Article
    4. A PXY-Mediated Transcriptional Network Integrates Signaling Mechanisms to Control Vascular Development in Arabidopsis. Smit ME, et al. Plant Cell, 2020 Feb. PMID 31806676, Free PMC Article
    5. Transcriptional regulation of nitrogen-associated metabolism and growth. Gaudinier A, et al. Nature, 2018 Nov. PMID 30356219

    See all (9) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    NM_001343972.1
    NM_180548.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables transcription cis-regulatory region binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    Process Evidence Code Pubs
    acts_upstream_of_or_within negative regulation of DNA-templated transcription TAS
    Traceable Author Statement
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    myb domain protein 86
    NP_850879.1
    • myb domain protein 86 (MYB86); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 50 (TAIR:AT1G57560.1); Has 9095 Blast hits to 8321 proteins in 479 species: Archae - 0; Bacteria - 3; Metazoa - 831; Fungi - 514; Plants - 5926; Viruses - 6; Other Eukaryotes - 1815 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      9331565..9333284 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_180548.4 → NP_850879.1  myb domain protein 86 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_850879.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      O22685, O65249, Q8LPH6, Q9SBF4
      UniProtKB/TrEMBL
      A0A178US07, A0A5S9Y7Z3
      Conserved Domains (1) summary
      PLN03091
      Location:1 → 133
      PLN03091; hypothetical protein; Provisional

    2. NM_001343972.1 → NP_001332393.1  myb domain protein 86 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8BGT1, A0A5S9Y7Z3
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q8LPH6.1

    Gene LinkOut

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