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    GLR2.3 glutamate receptor 2.3 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 817007, updated on 18-Sep-2024

    Summary

    Official Symbol
    GLR2.3
    Official Full Name
    glutamate receptor 2.3
    Primary source
    TAIR:AT2G24710
    Locus tag
    AT2G24710
    See related
    Araport:AT2G24710
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    ATGLR2.3; F27A10.2; F27A10_2; glutamate receptor 2.3
    Summary
    member of Putative ligand-gated ion channel subunit family
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    Genomic context

    See GLR2.3 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    5
    Sequence:
    Chromosome: 2; NC_003071.7 (10516780..10520684, complement)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene transcriptional factor B3 family protein Neighboring gene Transcriptional factor B3 family protein Neighboring gene glutamate receptor 2.2 Neighboring gene miscRNA

    General gene information

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables calcium channel activity ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    enables glutamate receptor activity ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    enables intracellularly ligand-gated monoatomic ion channel activity ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    enables ligand-gated monoatomic ion channel activity IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    involved_in calcium ion transport ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    involved_in calcium-mediated signaling ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    involved_in cellular response to amino acid stimulus ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    acts_upstream_of_or_within intracellular calcium ion homeostasis NAS
    Non-traceable Author Statement
    more info
    PubMed 
    acts_upstream_of_or_within response to light stimulus NAS
    Non-traceable Author Statement
    more info
    PubMed 
    Component Evidence Code Pubs
    located_in plasma membrane ISM
    Inferred from Sequence Model
    more info
     
    located_in plasma membrane ISS
    Inferred from Sequence or Structural Similarity
    more info
     

    General protein information

    Preferred Names
    glutamate receptor 2.3
    NP_180047.1
    • glutamate receptor 2.3 (GLR2.3); FUNCTIONS IN: intracellular ligand-gated ion channel activity; INVOLVED IN: cellular calcium ion homeostasis, response to light stimulus; LOCATED IN: endomembrane system, membrane; CONTAINS InterPro DOMAIN/s: Extracellular solute-binding protein, family 3 (InterPro:IPR001638), Ionotropic glutamate receptor (InterPro:IPR001320), Extracellular ligand-binding receptor (InterPro:IPR001828), Glutamate receptor-related (InterPro:IPR015683), Ionotropic glutamate-like receptor, plant (InterPro:IPR017103); BEST Arabidopsis thaliana protein match is: glutamate receptor 2.2 (TAIR:AT2G24720.1); Has 5318 Blast hits to 5220 proteins in 711 species: Archae - 48; Bacteria - 1305; Metazoa - 3164; Fungi - 0; Plants - 641; Viruses - 0; Other Eukaryotes - 160 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      10516780..10520684 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001335962.1NP_001325281.1  glutamate receptor 2.3 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8B2P3, A0A654EXA2
    2. NM_001335961.1NP_001325282.1  glutamate receptor 2.3 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8B2P4, A0A654EXA2
    3. NM_128032.1NP_180047.1  glutamate receptor 2.3 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_180047.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9SHV2
      UniProtKB/TrEMBL
      A0A654EXA2
      Conserved Domains (5) summary
      cd06366
      Location:44412
      PBP1_GABAb_receptor; Ligand-binding domain of GABAb receptors, which are metabotropic transmembrane receptors for gamma-aminobutyric acid (GABA)
      cd13686
      Location:452801
      GluR_Plant; Plant glutamate receptor domain; the type 2 periplasmic binding protein fold
      pfam00060
      Location:583841
      Lig_chan; Ligand-gated ion channel
      pfam01094
      Location:46392
      ANF_receptor; Receptor family ligand binding region
      cl21456
      Location:482682
      Periplasmic_Binding_Protein_Type_2; Type 2 periplasmic binding fold superfamily