Peroxidase superfamily protein [Arabidopsis thaliana (thale cress)] - Gene

Summary

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Official Full Name: Peroxidase superfamily protein
Primary source: TAIR:AT4G37520
Locus tag: AT4G37520
See related: Araport:AT4G37520
Gene type: protein coding
RefSeq status: REVIEWED
Organism: Arabidopsis thaliana (ecotype: Columbia)
Lineage: Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as: F19F18.10; F19F18_10
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Genomic context

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See in Genome Data Viewer

Location:: chromosome: 4

Exon count:: 4

Sequence:: Chromosome: 4; NC_003075.7 (17631500..17633249)

Chromosome 4 - NC_003075.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Go to reference sequence details

Genomic Sequence:: NC_003075.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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Interactions

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Products	Interactant	Other Gene	Complex	Source	Pubs	Description

General gene information

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Homology

Orthologs from OrthoDB

NM_001204015.2

Supported by ESTs:

NM_119916.4

Supported by ESTs:

Gene Ontology Provided by TAIR

Function	Evidence Code	Pubs
enables heme binding	IEA Inferred from Electronic Annotation more info
enables lactoperoxidase activity	IEA Inferred from Electronic Annotation more info
enables protein binding	IPI Inferred from Physical Interaction more info	PubMed

Process	Evidence Code	Pubs
involved_in response to oxidative stress	IEA Inferred from Electronic Annotation more info

Component	Evidence Code	Pubs
located_in cytoplasm	HDA more info	PubMed
located_in extracellular region	ISM Inferred from Sequence Model more info

General protein information

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Preferred Names: Peroxidase superfamily protein

NP_001190944.1

Peroxidase superfamily protein; FUNCTIONS IN: protein binding, peroxidase activity; INVOLVED IN: oxidation reduction, response to oxidative stress; LOCATED IN: cytoplasm; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT4G37530.1).

NP_195468.1

Peroxidase superfamily protein; FUNCTIONS IN: protein binding, peroxidase activity; INVOLVED IN: oxidation reduction, response to oxidative stress; LOCATED IN: cytoplasm; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT4G37530.1); Has 4636 Blast hits to 4606 proteins in 315 species: Archae - 0; Bacteria - 0; Metazoa - 9; Fungi - 258; Plants - 4294; Viruses - 0; Other Eukaryotes - 75 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

NC_003075.7 Reference assembly

Range

17631500..17633249

Download

GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

NM_119916.4 → NP_195468.1 Peroxidase superfamily protein [Arabidopsis thaliana]

See identical proteins and their annotated locations for NP_195468.1

Status: REVIEWED

UniProtKB/Swiss-Prot

Q43731, Q96523, Q9SBA1

UniProtKB/TrEMBL

A0A178V1L7, A0A5S9Y051, A0A7G2F6R7

Conserved Domains (1) summary

cd00693
Location:26 → 328

secretory_peroxidase; Horseradish peroxidase and related secretory plant peroxidases
NM_001204015.2 → NP_001190944.1 Peroxidase superfamily protein [Arabidopsis thaliana]

See identical proteins and their annotated locations for NP_001190944.1

Status: REVIEWED

UniProtKB/TrEMBL

A0A7G2F6R7, F4JS33

Conserved Domains (2) summary

cd00693
Location:26 → 325

secretory_peroxidase; Horseradish peroxidase and related secretory plant peroxidases

PLN03030
Location:28 → 326

PLN03030; cationic peroxidase; Provisional