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    expressed in response to phosphate starvation protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 831795, updated on 18-Sep-2024

    Summary

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    Official Full Name
    expressed in response to phosphate starvation protein
    Primary source
    TAIR:AT5G03545
    Locus tag
    AT5G03545
    See related
    Araport:AT5G03545
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    AT4; ATIPS2; INDUCED BY PI STARVATION 2
    Summary
    Expressed in response to phosphate starvation, this response is enhanced by the presence of IAA.
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    Genomic context

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    Location:
    chromosome: 5
    Exon count:
    1
    Sequence:
    Chromosome: 5; NC_003076.8 (894582..895517)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene RAB GTPase homolog 8C Neighboring gene RAB GTPase homolog C2A Neighboring gene exocyst subunit exo70 family protein A1 Neighboring gene MATH domain/coiled-coil protein Neighboring gene uncharacterized protein Neighboring gene ncRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Loss of At4 function impacts phosphate distribution between the roots and the shoots during phosphate starvation. Shin H, et al. Plant J, 2006 Mar. PMID 16460506
    2. Histone acetyltransferase GCN5-mediated regulation of long non-coding RNA At4 contributes to phosphate starvation response in Arabidopsis. Wang T, et al. J Exp Bot, 2019 Nov 18. PMID 31401648, Free PMC Article
    3. Border control--a membrane-linked interactome of Arabidopsis. Jones AM, et al. Science, 2014 May 16. PMID 24833385
    4. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. Histone acetyltransferase GCN5-mediated regulation of long non-coding RNA At4 contributes to phosphate starvation response in Arabidopsis.
      Title: Histone acetyltransferase GCN5-mediated regulation of long non-coding RNA At4 contributes to phosphate starvation response in Arabidopsis.
    2. At4 is involved in the internal allocation of phosphate (Pi) between shoot and roots . [At4]
      Title: Loss of At4 function impacts phosphate distribution between the roots and the shoots during phosphate starvation.
    Submit: New GeneRIF Correction

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    NM_180427.2

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within cellular response to phosphate starvation IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    acts_upstream_of_or_within phosphate ion transport IGI
    Inferred from Genetic Interaction
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in mitochondrion ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    expressed in response to phosphate starvation protein
    NP_850758.1
    • unknown protein; Has 7 Blast hits to 7 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 7; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      894582..895517
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_180427.2 → NP_850758.1  expressed in response to phosphate starvation protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_850758.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UNP8, C0Z298, Q9LZD2
    Nucleotide Protein
    Heading Accession and Version

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