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    flocculation protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 829270, updated on 18-Sep-2024

    Summary

    Official Full Name
    flocculation protein
    Primary source
    TAIR:AT4G31430
    Locus tag
    AT4G31430
    See related
    Araport:AT4G31430
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    (Japanese for nucleus) 4; F3L17.8; KAKU4
    Summary
    Encodes a plant-specific protein that physically interacts with CRWN1 and its homolog CRWN4 and localizes at the inner nuclear membrane. KAKU4 deforms the nuclear envelope in a dose-dependent manner, in association with nuclear membrane invagination and stack formation.
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    Genomic context

    Location:
    chromosome: 4
    Exon count:
    14
    Sequence:
    Chromosome: 4; NC_003075.7 (15248377..15252837)

    Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene E3 ubiquitin-protein ligase, putative (DUF1644) Neighboring gene Zinc finger protein 622 Neighboring gene transcriptional regulator of RNA polII, SAGA, subunit Neighboring gene uncharacterized protein

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    NM_001036687.1
    NM_119292.1
    NM_202924.2

    General protein information

    Preferred Names
    flocculation protein
    NP_001031764.1
    • unknown protein; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
    NP_567876.1
    • unknown protein; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
    NP_974653.1
    • unknown protein; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003075.7 Reference assembly

      Range
      15248377..15252837
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      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_202924.2NP_974653.1  flocculation protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_974653.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UT58
    2. NM_001036687.1NP_001031764.1  flocculation protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001031764.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      F4JS05, O49592, Q949W6
      UniProtKB/TrEMBL
      A0A178UT58
    3. NM_119292.1NP_567876.1  flocculation protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_567876.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      F4JS05, O49592, Q949W6
      UniProtKB/TrEMBL
      A0A178UT58