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    CBS domain protein (DUF21) [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 815939, updated on 18-Sep-2024

    Summary

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    Official Full Name
    CBS domain protein (DUF21)
    Primary source
    TAIR:AT2G14520
    Locus tag
    AT2G14520
    See related
    Araport:AT2G14520
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    T13P21.10; T13P21_10
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    Genomic context

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    Location:
    chromosome: 2
    Exon count:
    11
    Sequence:
    Chromosome: 2; NC_003071.7 (6181946..6184910, complement)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene Leucine-rich repeat protein kinase family protein Neighboring gene TRICHOME BIREFRINGENCE-LIKE 13 Neighboring gene pseudo

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003071.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    NM_127015.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in magnesium ion homeostasis IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in plasma membrane ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    CBS domain protein (DUF21)
    NP_179058.3
    • FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF21 (InterPro:IPR002550), Cystathionine beta-synthase, core (InterPro:IPR000644); BEST Arabidopsis thaliana protein match is: CBS domain-containing protein with a domain of unknown function (DUF21) (TAIR:AT4G33700.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      6181946..6184910 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001335424.1 → NP_001324216.1  CBS domain protein (DUF21) [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8AZH6

    2. NM_001335423.1 → NP_001324217.1  CBS domain protein (DUF21) [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8AZE8, A0A7G2EC81

    3. NM_001335425.1 → NP_001324218.1  CBS domain protein (DUF21) [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      F4IGE5, Q9ZQR4
      UniProtKB/TrEMBL
      A0A178VM05, A0A5S9WY11, A0A7G2EC81
      Conserved Domains (1) summary
      COG1253
      Location:10 → 308
      TlyC; Hemolysin or related protein, contains CBS domains [General function prediction only]

    4. NM_127015.4 → NP_179058.3  CBS domain protein (DUF21) [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_179058.3

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      F4IGE5, Q9ZQR4
      UniProtKB/TrEMBL
      A0A178VM05, A0A5S9WY11, A0A7G2EC81
      Conserved Domains (1) summary
      COG1253
      Location:10 → 308
      TlyC; Hemolysin or related protein, contains CBS domains [General function prediction only]
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9ZQR4.2

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