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    CG13220 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 36200, updated on 9-Dec-2024

    Summary

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    Official Symbol
    CG13220provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0033608
    Locus tag
    Dmel_CG13220
    See related
    AllianceGenome:FB:FBgn0033608
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    Dmel\CG13220
    Summary
    Is expressed in several structures, including adult head; adult heart; embryonic/larval midgut primordium; gut section; and mesoderm. [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See CG13220 in Genome Data Viewer
    Location:
    47E6-47E6; 2-64 cM
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2R NT_033778.4 (11284283..11285098)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2R NT_033778.3 (7171788..7172603)

    Chromosome 2R - NT_033778.4Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene von Hippel-Lindau Neighboring gene uncharacterized protein Neighboring gene F-box and leucine-rich repeat protein 6 Neighboring gene uncharacterized protein Neighboring gene defective in the avoidance of repellents Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Downregulation of vertebrate Tel (ETV6) and Drosophila Yan is facilitated by an evolutionarily conserved mechanism of F-box-mediated ubiquitination. Roukens MG, et al. Mol Cell Biol, 2008 Jul. PMID 18426905, Free PMC Article
    2. Robust RT-qPCR data normalization: validation and selection of internal reference genes during post-experimental data analysis. Ling D, et al. PLoS One, 2011 Mar 15. PMID 21423626, Free PMC Article
    3. A genetic screen and transcript profiling reveal a shared regulatory program for Drosophila linker histone H1 and chromatin remodeler CHD1. Kavi H, et al. G3 (Bethesda), 2015 Jan 27. PMID 25628309, Free PMC Article
    4. In vivo profiling of the Zucchini proximal proteome in the Drosophila ovary. Nguyen TTM, et al. Development, 2023 Feb 15. PMID 36762624
    5. The Drosophila Helicase Maleless (MLE) is Implicated in Functions Distinct From its Role in Dosage Compensation. Cugusi S, et al. Mol Cell Proteomics, 2015 Jun. PMID 25776889, Free PMC Article

    See all (26) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    General protein information

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    Preferred Names
    uncharacterized protein
    Names
    CG13220-PA
    CG13220-PB

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033778.4 Reference assembly

      Range
      11284283..11285098
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001273958.1 → NP_001260887.1  uncharacterized protein Dmel_CG13220, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001260887.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q6NP72
      Conserved Domains (1) summary
      cl11555
      Location:61 → 119
      DUF1129; Protein of unknown function (DUF1129)

    2. NM_136820.3 → NP_610664.1  uncharacterized protein Dmel_CG13220, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_610664.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q6NP72
      Related
      FBpp0087217
      Conserved Domains (1) summary
      cl11555
      Location:61 → 119
      DUF1129; Protein of unknown function (DUF1129)
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q6NP72 Q6NP72

    Gene LinkOut

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