U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    ppl pumpless [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 40349, updated on 9-Dec-2024

    Summary

    Official Symbol
    pplprovided by FlyBase
    Official Full Name
    pumplessprovided by FlyBase
    Primary source
    FLYBASE:FBgn0027945
    Locus tag
    Dmel_CG7758
    See related
    AllianceGenome:FB:FBgn0027945
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    CG7758; Dmel\CG7758; l(3)00217; l(3)78Cb
    Summary
    Predicted to be involved in glycine decarboxylation via glycine cleavage system. Predicted to be part of glycine cleavage complex. Predicted to be active in mitochondrion. Is expressed in several structures, including adult head; adult heart; anterior endoderm; embryonic/larval midgut primordium; and fat body. Human ortholog(s) of this gene implicated in multiple mitochondrial dysfunctions syndrome. Orthologous to human GCSH (glycine cleavage system protein H). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See ppl in Genome Data Viewer
    Location:
    78C4-78C4; 3-47 cM
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3L NT_037436.4 (21280491..21281506, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3L NT_037436.3 (21273591..21274606, complement)

    Chromosome 3L - NT_037436.4Genomic Context describing neighboring genes Neighboring gene antisense RNA:CR45162 Neighboring gene uncharacterized protein Neighboring gene Acetyl Coenzyme A synthase Neighboring gene uncharacterized protein Neighboring gene putzig

    Genomic regions, transcripts, and products

    Pathways from PubChem

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Gene Ontology Provided by FlyBase

    Process Evidence Code Pubs
    involved_in glycine catabolic process ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    involved_in glycine decarboxylation via glycine cleavage system IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in glycine decarboxylation via glycine cleavage system IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in glycine decarboxylation via glycine cleavage system ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    Component Evidence Code Pubs
    part_of glycine cleavage complex IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    part_of glycine cleavage complex IEA
    Inferred from Electronic Annotation
    more info
     
    part_of glycine cleavage complex ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    is_active_in mitochondrial matrix ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    is_active_in mitochondrion IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in mitochondrion ISS
    Inferred from Sequence or Structural Similarity
    more info
     

    General protein information

    Preferred Names
    pumpless
    Names
    CG7758-PA
    ppl-PA

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_037436.4 Reference assembly

      Range
      21280491..21281506 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_079473.4NP_524197.1  pumpless [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_524197.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9U616, Q9VP59
      Related
      FBpp0078066