U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    LOC102724200 trafficking protein particle complex subunit 10-like [ Homo sapiens (human) ]

    Gene ID: 102724200, updated on 10-Dec-2024

    Summary

    Go to the top of the page Help
    Gene symbol
    LOC102724200
    Gene description
    trafficking protein particle complex subunit 10-like
    See related
    Ensembl:ENSG00000280433
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Annotation information
    Annotation category: partial on reference assembly
    Note: GeneID:102724200 is on a scaffold that is thought to be a false duplication and thus this gene is likely redundant with GeneID:7109. [11 Jun 2021]
    Expression
    Ubiquitous expression in lymph node (RPKM 12.0), spleen (RPKM 10.4) and 25 other tissues See more
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See LOC102724200 in Genome Data Viewer
    Location:
    21p12
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 21 NC_000021.9 (5155774..5165464, complement)

    Chromosome 21 - NC_000021.9Genomic Context describing neighboring genes Neighboring gene glutamine amidotransferase class 1 domain containing 3B Neighboring gene periodic tryptophan protein 2 homolog Neighboring gene uncharacterized LOC105379488 Neighboring gene long intergenic non-protein coding RNA 1670

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_000021.9 Chromosome 21 Reference GRCh38.p14 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Expression

    Go to the top of the page Help
    • Project title: Tissue-specific circular RNA induction during human fetal development
    • Description: 35 human fetal samples from 6 tissues (3 - 7 replicates per tissue) collected between 10 and 20 weeks gestational time were sequenced using Illumina TruSeq Stranded Total RNA
    • BioProject: PRJNA270632
    • Publication: PMID 26076956
    • Analysis date: Mon Apr 2 22:54:59 2018

    Bibliography

    Go to the top of the pageHelp

    GeneRIFs: Gene References Into Functions

    Phenotypes

    Go to the top of the page Help

    Review eQTL and phenotype association data in this region using PheGenI

    Variation

    Go to the top of the page Help

    See studies and variants in dbVar

    General protein information

    Go to the top of the page Help
    Preferred Names
    trafficking protein particle complex subunit 10-like

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000021.9 Reference GRCh38.p14 Primary Assembly

      Range
      5155774..5165464 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_011546082.4 → XP_011544384.4  trafficking protein particle complex subunit 10-like

      Related
      ENST00000623998.1
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials