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    RpL17 Ribosomal protein L17 [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 31613, updated on 9-Dec-2024

    Summary

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    Official Symbol
    RpL17provided by FlyBase
    Official Full Name
    Ribosomal protein L17provided by FlyBase
    Primary source
    FLYBASE:FBgn0029897
    Locus tag
    Dmel_CG3203
    See related
    AllianceGenome:FB:FBgn0029897
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    anon-EST:Posey276; CG3203; Dmel\CG3203; L22; Rpl17
    Summary
    A structural constituent of ribosome. Predicted to be involved in cytoplasmic translation. Located in cytosolic ribosome. Is expressed in adult head; adult heart; and organism. Orthologous to human RPL17 (ribosomal protein L17). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See RpL17 in Genome Data Viewer
    Location:
    6C10-6C10; 1-18 cM
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) X NC_004354.4 (6741537..6744238, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) X NC_004354.3 (6635570..6638271, complement)

    Chromosome X - NC_004354.4Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene long non-coding RNA:CR43461 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene transfer RNA:Phenylalanine-GAA 1-2 Neighboring gene long non-coding RNA:CR44895 Neighboring gene long non-coding RNA:CR44964

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The cricket paralysis virus suppressor inhibits microRNA silencing mediated by the Drosophila Argonaute-2 protein. Besnard-Guérin C, et al. PLoS One, 2015. PMID 25793377, Free PMC Article
    2. Long-range spreading of dosage compensation in Drosophila captures transcribed autosomal genes inserted on X. Gorchakov AA, et al. Genes Dev, 2009 Oct 1. PMID 19797766, Free PMC Article
    3. AutomiG, a biosensor to detect alterations in miRNA biogenesis and in small RNA silencing guided by perfect target complementarity. Carré C, et al. PLoS One, 2013. PMID 24019960, Free PMC Article
    4. Local Microtubule and F-Actin Distributions Fully Constrain the Spatial Geometry of Drosophila Sensory Dendritic Arbors. Nanda S, et al. Int J Mol Sci, 2023 Apr 4. PMID 37047715, Free PMC Article
    5. Prediction of intestinal stem cell regulatory genes from Drosophila gut damage model created using multiple inducers: Differential gene expression-based protein-protein interaction network analysis. Lee SH, et al. Dev Comp Immunol, 2023 Jan. PMID 36087786

    See all (75) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Pathways from PubChem

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    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables structural constituent of ribosome IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables structural constituent of ribosome IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables structural constituent of ribosome IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables structural constituent of ribosome TAS
    Traceable Author Statement
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in cytoplasmic translation IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    involved_in cytoplasmic translation IC
    Inferred by Curator
    more info
    		 PubMed 
    involved_in cytoplasmic translation TAS
    Traceable Author Statement
    more info
    		 PubMed 
    involved_in translation IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    part_of cytosolic large ribosomal subunit IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    part_of cytosolic large ribosomal subunit TAS
    Traceable Author Statement
    more info
    		 PubMed 
    located_in cytosolic ribosome IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    part_of large ribosomal subunit IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in ribosome IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    ribosomal protein L17
    Names
    CG3203-PA
    CG3203-PB
    CG3203-PC
    CG3203-PD
    CG3203-PE
    RpL17-PA
    RpL17-PB
    RpL17-PC
    RpL17-PD
    RpL17-PE

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_004354.4 Reference assembly

      Range
      6741537..6744238 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_167088.2 → NP_727119.1  ribosomal protein L17, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_727119.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9W3W8
      UniProtKB/TrEMBL
      X2JIQ5
      Related
      FBpp0070940
      Conserved Domains (1) summary
      PTZ00178
      Location:1 → 162
      PTZ00178; 60S ribosomal protein L17; Provisional

    2. NM_167089.2 → NP_727120.1  ribosomal protein L17, isoform C [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_727120.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9W3W8
      UniProtKB/TrEMBL
      X2JIQ5
      Related
      FBpp0070941
      Conserved Domains (1) summary
      PTZ00178
      Location:1 → 162
      PTZ00178; 60S ribosomal protein L17; Provisional

    3. NM_132118.3 → NP_572346.1  ribosomal protein L17, isoform D [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_572346.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9W3W8
      UniProtKB/TrEMBL
      X2JIQ5
      Related
      FBpp0070942
      Conserved Domains (1) summary
      PTZ00178
      Location:1 → 162
      PTZ00178; 60S ribosomal protein L17; Provisional

    4. NM_167087.1 → NP_727118.1  ribosomal protein L17, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_727118.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9W3W8
      UniProtKB/TrEMBL
      X2JIQ5
      Related
      FBpp0070943, FBtr0070983
      Conserved Domains (1) summary
      PTZ00178
      Location:1 → 162
      PTZ00178; 60S ribosomal protein L17; Provisional

    5. NM_001298032.1 → NP_001284961.1  ribosomal protein L17, isoform E [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001284961.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9W3W8
      UniProtKB/TrEMBL
      X2JIQ5
      Conserved Domains (1) summary
      PTZ00178
      Location:1 → 162
      PTZ00178; 60S ribosomal protein L17; Provisional
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9W3W8.1 Q9W3W8
    X2JIQ5 X2JIQ5

    Gene LinkOut

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