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    Gapvd1 GTPase activating protein and VPS9 domains 1 [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 32070, updated on 9-Dec-2024

    Summary

    Official Symbol
    Gapvd1provided by FlyBase
    Official Full Name
    GTPase activating protein and VPS9 domains 1provided by FlyBase
    Primary source
    FLYBASE:FBgn0030286
    Locus tag
    Dmel_CG1657
    See related
    AllianceGenome:FB:FBgn0030286
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    CG1657; Dmel\CG1657; FBpp0073304; GAPVD1
    Summary
    Predicted to enable GTPase activating protein binding activity; guanyl-nucleotide exchange factor activity; and small GTPase binding activity. Predicted to be involved in regulation of Rab protein signal transduction and regulation of protein transport. Predicted to be active in cytosol and endocytic vesicle. Is expressed in adult fat body and spermatozoon. Used to study nephrotic syndrome. Orthologous to human GAPVD1 (GTPase activating protein and VPS9 domains 1). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
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    Genomic context

    See Gapvd1 in Genome Data Viewer
    Location:
    10B3-10B3; 1-34 cM
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) X NC_004354.4 (11325385..11334071)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) X NC_004354.3 (11219418..11228104)

    Chromosome X - NC_004354.4Genomic Context describing neighboring genes Neighboring gene sisterless A Neighboring gene lethal (1) 10Bb Neighboring gene Kinesin associated protein 3 Neighboring gene uncharacterized protein Neighboring gene Glucosidase 1

    Genomic regions, transcripts, and products

    Pathways from PubChem

    General gene information

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables GTPase activating protein binding ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    enables guanyl-nucleotide exchange factor activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables guanyl-nucleotide exchange factor activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables guanyl-nucleotide exchange factor activity ISM
    Inferred from Sequence Model
    more info
    PubMed 
    enables guanyl-nucleotide exchange factor activity ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    enables small GTPase binding IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Process Evidence Code Pubs
    involved_in regulation of Rab protein signal transduction ISM
    Inferred from Sequence Model
    more info
    PubMed 
    involved_in regulation of protein transport ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    involved_in vesicle-mediated transport IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    is_active_in cytosol IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in cytosol ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    is_active_in endocytic vesicle IBA
    Inferred from Biological aspect of Ancestor
    more info
     

    General protein information

    Preferred Names
    GTPase activating protein and VPS9 domains 1
    Names
    CG1657-PA
    Gapvd1-PA

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_004354.4 Reference assembly

      Range
      11325385..11334071
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_132476.3NP_572704.1  GTPase activating protein and VPS9 domains 1 [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_572704.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      B4YWV1, Q95RG2, Q9VZ08
      Related
      FBpp0073304
      Conserved Domains (2) summary
      cd05129
      Location:90460
      RasGAP_RAP6; Ras-GTPase Activating Domain of Rab5-activating protein 6
      pfam02204
      Location:16091709
      VPS9; Vacuolar sorting protein 9 (VPS9) domain