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    pkm Pinkman [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 32108, updated on 9-Dec-2024

    Summary

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    Official Symbol
    pkmprovided by FlyBase
    Official Full Name
    Pinkmanprovided by FlyBase
    Primary source
    FLYBASE:FBgn0030317
    Locus tag
    Dmel_CG1561
    See related
    AllianceGenome:FB:FBgn0030317
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    CG1561; Dmel\CG1561; Dro37-0
    Summary
    Predicted to enable ecdysteroid 22-kinase activity. Is expressed in adult head; eye; mesoderm anlage; organism; and ventral ectoderm anlage. [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See pkm in Genome Data Viewer
    Location:
    10C7-10C7; 1-35 cM
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) X NC_004354.4 (11581957..11584175, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) X NC_004354.3 (11475990..11478208, complement)

    Chromosome X - NC_004354.4Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene long non-coding RNA on the X 2 Neighboring gene no distributive disjunction Neighboring gene pseudo Neighboring gene pseudo

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. MLE functions as a transcriptional regulator of the roX2 gene. Lee CG, et al. J Biol Chem, 2004 Nov 12. PMID 15358781
    2. Small heat shock proteins determine synapse number and neuronal activity during development. Santana E, et al. PLoS One, 2020. PMID 32437379, Free PMC Article
    3. Quantitative evolutionary genomics: differential gene expression and male reproductive success in Drosophila melanogaster. Drnevich JM, et al. Proc Biol Sci, 2004 Nov 7. PMID 15539352, Free PMC Article
    4. Modeling spinal muscular atrophy in Drosophila. Chang HC, et al. PLoS One, 2008 Sep 15. PMID 18791638, Free PMC Article
    5. The chromosomal high-affinity binding sites for the Drosophila dosage compensation complex. Straub T, et al. PLoS Genet, 2008 Dec. PMID 19079572, Free PMC Article

    See all (32) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables ecdysteroid 22-kinase activity TAS
    Traceable Author Statement
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    pinkman
    Names
    CG1561-PB
    pkm-PB

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_004354.4 Reference assembly

      Range
      11581957..11584175 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_206689.2 → NP_996412.1  pinkman [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_996412.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q7KV34
      Conserved Domains (1) summary
      pfam02958
      Location:257 → 546
      EcKinase; Ecdysteroid kinase
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q7KV34 Q7KV34
    Q9VYW8 Q9VYW8

    Gene LinkOut

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