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    CG6013 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 42286, updated on 9-Dec-2024

    Summary

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    Official Symbol
    CG6013provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0038675
    Locus tag
    Dmel_CG6013
    See related
    AllianceGenome:FB:FBgn0038675
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    Dmel\CG6013
    Summary
    Predicted to enable transcription coactivator activity. Predicted to be involved in transcription by RNA polymerase II. Predicted to be active in nucleus. Is expressed in adult head and organism. Orthologous to human CCDC124 (coiled-coil domain containing 124). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See CG6013 in Genome Data Viewer
    Location:
    91E4-91E4; 3-65 cM
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3R NT_033777.3 (19031503..19032409)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3R NT_033777.2 (14857225..14858131)

    Chromosome 3R - NT_033777.3Genomic Context describing neighboring genes Neighboring gene NP15.6 Neighboring gene Glutamyl-tRNA amidotransferase, subunit A Neighboring gene Pyrroline 5-carboyxlate reductase Neighboring gene Prp18 Neighboring gene uncharacterized protein Neighboring gene center divider Neighboring gene long non-coding RNA:CR46041

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Mutations in the Drosophila mitochondrial tRNA amidotransferase, bene/gatA, cause growth defects in mitotic and endoreplicating tissues. Morris JZ, et al. Genetics, 2008 Feb. PMID 18245325, Free PMC Article
    2. Domesticated LTR-Retrotransposon gag-Related Gene (Gagr) as a Member of the Stress Response Network in Drosophila. Nefedova L, et al. Life (Basel), 2022 Mar 3. PMID 35330115, Free PMC Article
    3. ZNF598 co-translationally titrates poly(GR) protein implicated in the pathogenesis of C9ORF72-associated ALS/FTD. Park J, et al. Nucleic Acids Res, 2021 Nov 8. PMID 34551427, Free PMC Article
    4. The 5'-3' exoribonuclease Pacman (Xrn1) regulates expression of the heat shock protein Hsp67Bc and the microRNA miR-277-3p in Drosophila wing imaginal discs. Jones CI, et al. RNA Biol, 2013 Aug. PMID 23792537, Free PMC Article
    5. Nociceptor-Enriched Genes Required for Normal Thermal Nociception. Honjo K, et al. Cell Rep, 2016 Jul 12. PMID 27346357, Free PMC Article

    See all (28) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables transcription coactivator activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Process Evidence Code Pubs
    involved_in transcription by RNA polymerase II IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Component Evidence Code Pubs
    is_active_in nucleus IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

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    Preferred Names
    uncharacterized protein
    Names
    CG6013-PA

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033777.3 Reference assembly

      Range
      19031503..19032409
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_142520.4 → NP_650777.1  uncharacterized protein Dmel_CG6013 [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_650777.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9VE08
      Related
      FBpp0083128
      Conserved Domains (1) summary
      pfam06244
      Location:93 → 211
      DUF1014; Protein of unknown function (DUF1014)
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9VE08 Q9VE08

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

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