U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    LIMK1 LIM domain kinase 1 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 699494, updated on 17-Aug-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    LIMK1provided by VGNC
    Official Full Name
    LIM domain kinase 1provided by VGNC
    Primary source
    VGNC:VGNC:74269
    See related
    Ensembl:ENSMMUG00000003128
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See LIMK1 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    17
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 3 NC_041756.1 (46452919..46489019)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 3 NC_027895.1 (43289184..43325307, complement)

    Chromosome 3 - NC_041756.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC106997361 Neighboring gene elastin Neighboring gene eukaryotic translation initiation factor 4H Neighboring gene microRNA mir-590 Neighboring gene linker for activation of T cells family member 2

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein serine/threonine kinase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in actin cytoskeleton organization IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in positive regulation of stress fiber assembly IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in protein phosphorylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in neuron projection IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    LIM domain kinase 1
    XP_014988830.1
    XP_014988831.1

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041756.1 Reference Mmul_10 Primary Assembly

      Range
      46452919..46489019
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015133344.2 → XP_014988830.1  LIM domain kinase 1 isoform X1

      UniProtKB/TrEMBL
      G7MP11, H9ESB9, H9H4E6
      Related
      ENSMMUP00000032130.3, ENSMMUT00000039048.3
      Conserved Domains (4) summary
      cd09462
      Location:5 → 77
      LIM1_LIMK1; The first LIM domain of LIMK1 (LIM domain Kinase 1)
      cd14221
      Location:345 → 611
      STKc_LIMK1; Catalytic domain of the Serine/Threonine Kinase, LIM domain kinase 1
      pfam00595
      Location:165 → 255
      PDZ; PDZ domain (Also known as DHR or GLGF)
      cl02475
      Location:84 → 138
      LIM; LIM is a small protein-protein interaction domain, containing two zinc fingers

    2. XM_015133345.2 → XP_014988831.1  LIM domain kinase 1 isoform X2

      UniProtKB/TrEMBL
      G7MP11, H9H2W5
      Related
      ENSMMUP00000004182.4, ENSMMUT00000004433.4
      Conserved Domains (4) summary
      cd09464
      Location:50 → 104
      LIM2_LIMK1; The second LIM domain of LIMK1 (LIM domain Kinase 1)
      cd14221
      Location:311 → 577
      STKc_LIMK1; Catalytic domain of the Serine/Threonine Kinase, LIM domain kinase 1
      pfam00595
      Location:131 → 221
      PDZ; PDZ domain (Also known as DHR or GLGF)
      cl02475
      Location:17 → 43
      LIM; LIM is a small protein-protein interaction domain, containing two zinc fingers
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials