U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    BCL11A BCL11 transcription factor A [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 717675, updated on 17-Aug-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    BCL11Aprovided by VGNC
    Official Full Name
    BCL11 transcription factor Aprovided by VGNC
    Primary source
    VGNC:VGNC:70055
    See related
    Ensembl:ENSMMUG00000011303
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See BCL11A in Genome Data Viewer
    Location:
    chromosome: 13
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 13 NC_041766.1 (48272312..48373771)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 13 NC_027905.1 (61237810..61338060, complement)

    Chromosome 13 - NC_041766.1Genomic Context describing neighboring genes Neighboring gene activated RNA polymerase II transcriptional coactivator p15 pseudogene Neighboring gene 60S ribosomal protein L26 pseudogene Neighboring gene uncharacterized LOC114671962 Neighboring gene uncharacterized LOC106992966 Neighboring gene U1 spliceosomal RNA

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in negative regulation of dendrite development IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    B-cell lymphoma/leukemia 11A
    Names
    B cell CLL/lymphoma 11A
    BAF chromatin remodeling complex subunit BCL11A
    BCL11A, BAF complex component

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041766.1 Reference Mmul_10 Primary Assembly

      Range
      48272312..48373771
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015112435.2 → XP_014967921.1  B-cell lymphoma/leukemia 11A isoform X1

      UniProtKB/TrEMBL
      A0A5F8AA68, H9Z008
      Conserved Domains (3) summary
      sd00017
      Location:744 → 764
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam00096
      Location:743 → 764
      zf-C2H2; Zinc finger, C2H2 type
      pfam13465
      Location:391 → 416
      zf-H2C2_2; Zinc-finger double domain

    2. XM_015112438.2 → XP_014967924.1  B-cell lymphoma/leukemia 11A isoform X4

      UniProtKB/TrEMBL
      A0A5F8AA68, A0A5F8AKC2
      Related
      ENSMMUP00000077389.1, ENSMMUT00000092218.1
      Conserved Domains (3) summary
      sd00017
      Location:710 → 730
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam00096
      Location:709 → 730
      zf-C2H2; Zinc finger, C2H2 type
      pfam13465
      Location:357 → 382
      zf-H2C2_2; Zinc-finger double domain

    3. XM_015112440.2 → XP_014967926.1  B-cell lymphoma/leukemia 11A isoform X5

      UniProtKB/TrEMBL
      A0A5F8AA68
      Conserved Domains (4) summary
      sd00017
      Location:345 → 365
      ZF_C2H2; C2H2 Zn finger [structural motif]
      sd00019
      Location:710 → 730
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam00096
      Location:709 → 730
      zf-C2H2; Zinc finger, C2H2 type
      pfam13465
      Location:357 → 382
      zf-H2C2_2; Zinc-finger double domain

    4. XM_015112437.2 → XP_014967923.1  B-cell lymphoma/leukemia 11A isoform X3

      UniProtKB/TrEMBL
      A0A5F8AA68
      Conserved Domains (4) summary
      sd00017
      Location:379 → 399
      ZF_C2H2; C2H2 Zn finger [structural motif]
      sd00019
      Location:744 → 764
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam00096
      Location:743 → 764
      zf-C2H2; Zinc finger, C2H2 type
      pfam13465
      Location:391 → 416
      zf-H2C2_2; Zinc-finger double domain

    5. XM_015112443.2 → XP_014967929.1  B-cell lymphoma/leukemia 11A isoform X8

      UniProtKB/TrEMBL
      A0A5F8AA68, F6UND0, H9ZA61
      Related
      ENSMMUP00000014826.3, ENSMMUT00000015825.4
      Conserved Domains (3) summary
      sd00017
      Location:379 → 399
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam00096
      Location:378 → 399
      zf-C2H2; Zinc finger, C2H2 type
      pfam13465
      Location:391 → 416
      zf-H2C2_2; Zinc-finger double domain

    6. XM_015112444.2 → XP_014967930.1  B-cell lymphoma/leukemia 11A isoform X10

      UniProtKB/TrEMBL
      H9FVW4

    7. XM_028832461.1 → XP_028688294.1  B-cell lymphoma/leukemia 11A isoform X7

      UniProtKB/TrEMBL
      G7NA44
      Conserved Domains (3) summary
      sd00017
      Location:692 → 712
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam00096
      Location:691 → 712
      zf-C2H2; Zinc finger, C2H2 type
      pfam13465
      Location:339 → 364
      zf-H2C2_2; Zinc-finger double domain

    8. XM_015112441.2 → XP_014967927.1  B-cell lymphoma/leukemia 11A isoform X6

      UniProtKB/TrEMBL
      G7NA44
      Conserved Domains (4) summary
      sd00017
      Location:343 → 363
      ZF_C2H2; C2H2 Zn finger [structural motif]
      sd00019
      Location:708 → 728
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam00096
      Location:707 → 728
      zf-C2H2; Zinc finger, C2H2 type
      pfam13465
      Location:355 → 380
      zf-H2C2_2; Zinc-finger double domain

    9. XM_015112436.2 → XP_014967922.1  B-cell lymphoma/leukemia 11A isoform X2

      UniProtKB/TrEMBL
      G7NA44
      Conserved Domains (3) summary
      sd00017
      Location:742 → 762
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam00096
      Location:741 → 762
      zf-C2H2; Zinc finger, C2H2 type
      pfam13465
      Location:389 → 414
      zf-H2C2_2; Zinc-finger double domain

    10. XM_028832462.1 → XP_028688295.1  B-cell lymphoma/leukemia 11A isoform X9

      UniProtKB/TrEMBL
      G7NA44
      Related
      ENSMMUP00000076389.1, ENSMMUT00000090147.1
      Conserved Domains (3) summary
      sd00019
      Location:377 → 397
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam00096
      Location:376 → 397
      zf-C2H2; Zinc finger, C2H2 type
      pfam13465
      Location:389 → 414
      zf-H2C2_2; Zinc-finger double domain

    11. XM_015112442.2 → XP_014967928.1  B-cell lymphoma/leukemia 11A isoform X7

      UniProtKB/TrEMBL
      G7NA44
      Related
      ENSMMUP00000074838.1, ENSMMUT00000097395.1
      Conserved Domains (3) summary
      sd00017
      Location:692 → 712
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam00096
      Location:691 → 712
      zf-C2H2; Zinc finger, C2H2 type
      pfam13465
      Location:339 → 364
      zf-H2C2_2; Zinc-finger double domain
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.