U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    KLF3 KLF transcription factor 3 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 697724, updated on 17-Aug-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    KLF3provided by VGNC
    Official Full Name
    KLF transcription factor 3provided by VGNC
    Primary source
    VGNC:VGNC:73840
    Locus tag
    EGK_15646
    See related
    Ensembl:ENSMMUG00000003363
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See KLF3 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 5 NC_041758.1 (37797507..37831974)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 5 NC_027897.1 (38304315..38338846)

    Chromosome 5 - NC_041758.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC114678152 Neighboring gene putative uncharacterized protein FLJ13197 Neighboring gene uncharacterized LOC114678278 Neighboring gene uncharacterized LOC106998310 Neighboring gene uncharacterized LOC114678153

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Genome sequencing and comparison of two nonhuman primate animal models, the cynomolgus and Chinese rhesus macaques. Yan G, et al. Nat Biotechnol, 2011 Oct 16. PMID 22002653
    2. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    Krueppel-like factor 3
    Names
    Basic krueppel-like factor
    Kruppel like factor 3

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001261280.1 → NP_001248209.1  Krueppel-like factor 3

      See identical proteins and their annotated locations for NP_001248209.1

      Status: PROVISIONAL

      Source sequence(s)
      JV047272
      UniProtKB/TrEMBL
      A0A8J8XGI0, F7E8X0, G7MSQ9
      Related
      ENSMMUP00000004480.2, ENSMMUT00000004753.4
      Conserved Domains (4) summary
      sd00017
      Location:262 → 284
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam00096
      Location:260 → 284
      zf-C2H2; Zinc finger, C2H2 type
      pfam13465
      Location:306 → 331
      zf-H2C2_2; Zinc-finger double domain
      cd21577
      Location:49 → 260
      KLF3_N; N-terminal domain of Kruppel-like factor 3

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041758.1 Reference Mmul_10 Primary Assembly

      Range
      37797507..37831974
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015138149.2 → XP_014993635.1  Krueppel-like factor 3 isoform X1

      UniProtKB/TrEMBL
      A0A8J8XGI0, F7E8X0, G7MSQ9
      Related
      ENSMMUP00000073578.1, ENSMMUT00000106210.1
      Conserved Domains (4) summary
      sd00017
      Location:262 → 284
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam00096
      Location:260 → 284
      zf-C2H2; Zinc finger, C2H2 type
      pfam13465
      Location:306 → 331
      zf-H2C2_2; Zinc-finger double domain
      cd21577
      Location:49 → 260
      KLF3_N; N-terminal domain of Kruppel-like factor 3

    2. XM_015138150.2 → XP_014993636.1  Krueppel-like factor 3 isoform X1

      UniProtKB/TrEMBL
      A0A8J8XGI0, F7E8X0, G7MSQ9
      Conserved Domains (4) summary
      sd00017
      Location:262 → 284
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam00096
      Location:260 → 284
      zf-C2H2; Zinc finger, C2H2 type
      pfam13465
      Location:306 → 331
      zf-H2C2_2; Zinc-finger double domain
      cd21577
      Location:49 → 260
      KLF3_N; N-terminal domain of Kruppel-like factor 3

    3. XM_015138151.2 → XP_014993637.1  Krueppel-like factor 3 isoform X2

      Conserved Domains (4) summary
      COG5189
      Location:233 → 315
      SFP1; Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]
      sd00017
      Location:237 → 259
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam13465
      Location:281 → 306
      zf-H2C2_2; Zinc-finger double domain
      cd21577
      Location:24 → 235
      KLF3_N; N-terminal domain of Kruppel-like factor 3
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.