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    TNFSF4 TNF superfamily member 4 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 706255, updated on 17-Aug-2024

    Summary

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    Official Symbol
    TNFSF4provided by VGNC
    Official Full Name
    TNF superfamily member 4provided by VGNC
    Primary source
    VGNC:VGNC:78598
    Locus tag
    EGK_01976
    See related
    Ensembl:ENSMMUG00000061368
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Also known as
    TNLG2B
    Orthologs
    human mouse all
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    Genomic context

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    See TNFSF4 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 1 NC_041754.1 (30488962..30767011, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 1 NC_027893.1 (194087466..194370388)

    Chromosome 1 - NC_041754.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC106994771 Neighboring gene uncharacterized LOC114679251 Neighboring gene TNF superfamily member 18 Neighboring gene small nucleolar RNA U13 Neighboring gene centrosomal protein of 57 kDa pseudogene Neighboring gene T-complex protein 1 subunit alpha pseudogene Neighboring gene peroxiredoxin 6 Neighboring gene solute carrier family 9 member C2 (putative)

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Comparative genomic analysis of eutherian tumor necrosis factor ligand genes. Premzl M. Immunogenetics, 2016 Feb. PMID 26646413
    2. Genome sequencing and comparison of two nonhuman primate animal models, the cynomolgus and Chinese rhesus macaques. Yan G, et al. Nat Biotechnol, 2011 Oct 16. PMID 22002653
    3. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    4. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    5. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables cytokine activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables tumor necrosis factor receptor binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in immune response IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    tumor necrosis factor ligand superfamily member 4
    Names
    tumor necrosis factor (ligand) superfamily, member 4 (tax-transcriptionally activated glycoprotein 1, 34kDa)
    tumor necrosis factor ligand 2B
    tumor necrosis factor superfamily member 4

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041754.1 Reference Mmul_10 Primary Assembly

      Range
      30488962..30767011 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015123997.2 → XP_014979483.1  tumor necrosis factor ligand superfamily member 4

      UniProtKB/TrEMBL
      A0A1D5QQH7, A0A8J8YKS3, F7FL80, G7MFC8
      Related
      ENSMMUP00000050304.2, ENSMMUT00000070883.2
      Conserved Domains (1) summary
      smart00207
      Location:74 → 183
      TNF; Tumour necrosis factor family

    2. XM_015123982.2 → XP_014979468.1  tumor necrosis factor ligand superfamily member 4

      UniProtKB/TrEMBL
      A0A1D5QQH7, A0A8J8YKS3, F7FL80, G7MFC8
      Conserved Domains (1) summary
      smart00207
      Location:74 → 183
      TNF; Tumour necrosis factor family

    3. XM_015123991.2 → XP_014979477.1  tumor necrosis factor ligand superfamily member 4

      UniProtKB/TrEMBL
      A0A1D5QQH7, A0A8J8YKS3, F7FL80, G7MFC8
      Conserved Domains (1) summary
      smart00207
      Location:74 → 183
      TNF; Tumour necrosis factor family

    4. XM_028850506.1 → XP_028706339.1  tumor necrosis factor ligand superfamily member 4

      UniProtKB/TrEMBL
      A0A1D5QQH7, A0A8J8YKS3, F7FL80, G7MFC8
      Conserved Domains (1) summary
      smart00207
      Location:74 → 183
      TNF; Tumour necrosis factor family

    5. XM_001101190.4 → XP_001101190.1  tumor necrosis factor ligand superfamily member 4

      See identical proteins and their annotated locations for XP_001101190.1

      UniProtKB/TrEMBL
      A0A1D5QQH7, A0A8J8YKS3, F7FL80, G7MFC8
      Conserved Domains (1) summary
      smart00207
      Location:74 → 183
      TNF; Tumour necrosis factor family

    6. XM_015123968.2 → XP_014979454.1  tumor necrosis factor ligand superfamily member 4

      UniProtKB/TrEMBL
      A0A1D5QQH7, A0A8J8YKS3, F7FL80, G7MFC8
      Conserved Domains (1) summary
      smart00207
      Location:74 → 183
      TNF; Tumour necrosis factor family

    7. XM_015124003.2 → XP_014979489.1  tumor necrosis factor ligand superfamily member 4

      UniProtKB/TrEMBL
      A0A1D5QQH7, A0A8J8YKS3, F7FL80, G7MFC8
      Conserved Domains (1) summary
      smart00207
      Location:74 → 183
      TNF; Tumour necrosis factor family

    8. XM_028850527.1 → XP_028706360.1  tumor necrosis factor ligand superfamily member 4

      UniProtKB/TrEMBL
      A0A1D5QQH7, A0A8J8YKS3, F7FL80, G7MFC8
      Conserved Domains (1) summary
      smart00207
      Location:74 → 183
      TNF; Tumour necrosis factor family

    RNA

    1. XR_003730952.1 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

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    Research Materials