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    S100A9 S100 calcium binding protein A9 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 714690, updated on 17-Aug-2024

    Summary

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    Official Symbol
    S100A9provided by VGNC
    Official Full Name
    S100 calcium binding protein A9provided by VGNC
    Primary source
    VGNC:VGNC:76961
    Locus tag
    EGK_01322
    See related
    Ensembl:ENSMMUG00000006868
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See S100A9 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 1 NC_041754.1 (97696189..97699439, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 1 NC_027893.1 (127955297..127958533)

    Chromosome 1 - NC_041754.1Genomic Context describing neighboring genes Neighboring gene lysosomal-associated transmembrane protein 4B-like Neighboring gene S100 calcium binding protein A12 Neighboring gene peptidoglycan recognition protein 4 Neighboring gene U6 spliceosomal RNA Neighboring gene peptidoglycan recognition protein 3

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables calcium ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in antimicrobial humoral immune response mediated by antimicrobial peptide IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in astrocyte development IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in autocrine signaling IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in chronic inflammatory response IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in endothelial cell migration IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in leukocyte migration involved in inflammatory response IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in neutrophil aggregation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in neutrophil chemotaxis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in peptidyl-cysteine S-nitrosylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of integrin biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in response to lipopolysaccharide IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in extracellular exosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    protein S100-A9

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041754.1 Reference Mmul_10 Primary Assembly

      Range
      97696189..97699439 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015152918.2 → XP_015008404.1  protein S100-A9

      UniProtKB/TrEMBL
      A0A8J8YHX5, F7F8G8, G7MDQ9
      Related
      ENSMMUP00000009023.2, ENSMMUT00000009602.4
      Conserved Domains (1) summary
      cd05030
      Location:6 → 94
      calgranulins; Calgranulins: S-100 domain found in proteins belonging to the Calgranulin subgroup of the S100 family of EF-hand calcium-modulated proteins, including S100A8, S100A9, and S100A12 . Note that the S-100 hierarchy, to which this Calgranulin group belongs, ...
    Nucleotide Protein
    Heading Accession and Version

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